Gene Rfer_4124 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_4124 
Symbol 
ID3961822 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand- 
Start bp4600882 
End bp4601526 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content63% 
IMG OID637918948 
Producthypothetical protein 
Protein accessionYP_525353 
Protein GI89902882 
COG category[R] General function prediction only 
COG ID[COG1999] Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCAAGA CTGCGTTGCT GAGCGCCAGC CTGGCCGTGG CCGGCTATGC CTGCTCAGCT 
TGGCTGACCC ACGACTTTCA GGTCTGGACG GCCGAAGGTG CGCGGCGCCT GGAAGTGGCC 
CTGCAGCCCA TTGCTGCGCC TTCCGTGCAA ATTGACGGCC CCGGTGTGAC CGCACAGGCT 
TTGTCGCAAC TCTTGTCCGA CGGCCAATCC GTCACCCTGG TTGATTTCGT TTACACCCGC 
TGCCAGACCG TGTGTCTGGC GCTGGGCAGC GTTTATCAGC AAATGCAGAC CACGCTGCAA 
GCGGCCAGAA AAACCGACGC CGCTGCGCGC CAGGTAAGAC TGCTGTCGAT CAGCTTCGAC 
GGGCAGCACG ACAACCCACG GATTCTGGAG GCTTACGCCG CGCGTCTGGG CGCCGATCAG 
CTGCTGTGGC GTTTTGTTCG CGTGCCGGAT CCGAAAGAAA CACAGCGCCT GCTGGCGGAT 
TTTCAGGTCA TCGTCGTCCC TGACGGTCGA GGCGCTTTCG AGCACAACGC GGCGCTGCTG 
GTGGTCAACC AGCACGGACA ACTGGTGCGC ATCTTTGATT ATGCGGAGCA GCAACTGGCC 
CTCGACTACG CCCGCGACCT GGCGAACGCC GCTTCACCAC GATGA
 
Protein sequence
MLKTALLSAS LAVAGYACSA WLTHDFQVWT AEGARRLEVA LQPIAAPSVQ IDGPGVTAQA 
LSQLLSDGQS VTLVDFVYTR CQTVCLALGS VYQQMQTTLQ AARKTDAAAR QVRLLSISFD 
GQHDNPRILE AYAARLGADQ LLWRFVRVPD PKETQRLLAD FQVIVVPDGR GAFEHNAALL 
VVNQHGQLVR IFDYAEQQLA LDYARDLANA ASPR