Gene Rfer_4107 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_4107 
Symbol 
ID3961805 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand+ 
Start bp4585073 
End bp4585696 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content59% 
IMG OID637918931 
Producthypothetical protein 
Protein accessionYP_525336 
Protein GI89902865 
COG category[S] Function unknown 
COG ID[COG4832] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0941268 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAAAA TCGATTGGAA AAAGGAACTC AAGCACCTGT ACCAGGCCTC CGCCCGAGAG 
GTGATGCAAG TAGAGGTCCC AGCCATGAAC TACCTGATGG TGGACGGCCA GGGCGACCCG 
AACACCTCGC AGGAATACGC CGATGCGGTC GCTGCCCTGT TTGCAACGGC CTACAGCCTC 
AAGTTCATGG TCAAGAAAGG GGCGCTCGCC ATCGACTACG GTGTGATGCC GCTGGAAGGC 
TTGTGGTGGG CGAAGGACAT GAGCAAGTTC AGCCCCGACG ACAAAAGCAA CTGGCTGTGG 
ACAGCGATGA TCGCGCAGCC GCCTTTCATC ACGCGGGAGA TGGTGGACAC CGCCATCGCC 
GCAGTGGCCA AGAAGAAGAA CCCGGCGGCC ATTTCCAGGC TGCGCTTTGA GGCTTACACC 
GAAGGCCGTT GCGCGCAGAT CATGCACATT GGCCCCTTCA GCGAAGAGGG GCCTGCGATA 
GAAAAGTTGC ATCATTTCAT CCAGGCCAGC GGGCACAAGC GGCACGGCAA GCACCACGAG 
ATCTACCTGA GCGACATCAG CAAAGCCGCT CCGGCGAAAT GGAAGACCCT CATTCGCCAG 
CCTATGTCGC CATCCGAACG ATGA
 
Protein sequence
MEKIDWKKEL KHLYQASARE VMQVEVPAMN YLMVDGQGDP NTSQEYADAV AALFATAYSL 
KFMVKKGALA IDYGVMPLEG LWWAKDMSKF SPDDKSNWLW TAMIAQPPFI TREMVDTAIA 
AVAKKKNPAA ISRLRFEAYT EGRCAQIMHI GPFSEEGPAI EKLHHFIQAS GHKRHGKHHE 
IYLSDISKAA PAKWKTLIRQ PMSPSER