| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_4071 |
|---|
| Symbol | |
|---|
| ID | 3961750 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | + |
|---|
| Start bp | 4540438 |
|---|
| End bp | 4541370 |
|---|
| Gene Length | 933 bp |
|---|
| Protein Length | 310 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637918895 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_525300 |
|---|
| Protein GI | 89902829 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCAGAA AAATCCCATC GCTCCAGGCC CTAGCCTGCT TTGAAGCGGC CGCCCGCCAG
CAAAGCTACA CGCGTGCCGC ACAAGAGCTG GCGCTGACGC AAGGCGCGGT ATCGCGGCAG
ATCACGGCGC TGGAAGAATT CTTGGGGCTT GCCCTGTTTC GCCGCACCCG TCACGGCGTG
CTGCTGACCG AGCGCGGCGC CGATTACTTC GCCCAGGTGG CGCCGCGCCT GCAGGCGCTG
GAGCAGGACA CGCTGGACGC CATGTCGGCC CAGGGCCCGG GCGGCACCCT GCATCTGGCG
GCAGTGCCGA CCTTTGCCAC GCGCTGGCTG ATCCCGCGCC TGGCGGACCT GAAACGGCTG
CAGCCCGATC TGACCATCCA CATTGAAACC AGCACCCGCC CCTTCATGTT TGCCGACACG
GTGTTTGATG CGGCGCTGTA TGCCGGCACG CCGGAGCAGG TGAGCCAGTG GGCGGGCACA
CGCGCGCTGC GGCTGCTGGC CGAACAGGTG GTGCCGGTTT GCAGCCCGCA TTTTCTGGCC
GGGCAGAGCA GCTTGAGCCC CGCGGCCATT GCCGACCTGC CTTTGCTGCA GCAAAGCACC
CGCACCGAGG CCTGGCGGCG CTGGTTTGAC GCCATGGGCG TGAGTGCGCC GCTGGCCTTG
TCGGGGCCGC GCTTTGAGTT GTTTTCCATG ACCGCTGCCG CCGCCGCGCA CGGCCTGGGT
CTGGCGCTGG TACCCCGCTT GCTGATTGAA CCCGAACTGG CCCGCGGCGA ACTGGTGGTG
GCCTGTGAGC GCGTGCTACC CAGTGAGCGC GCTTACTACC TGGTCACGCC GCAGGCGCCC
GACGAGCGGC CGGTCATCAA TGGATTTGTG CGCTGGCTGC AGAAAGCTGC GGCCCAGACT
GCGGAAACGC CTGATGTTGA GACCGCCAGT TAG
|
|---|
| Protein sequence | MRRKIPSLQA LACFEAAARQ QSYTRAAQEL ALTQGAVSRQ ITALEEFLGL ALFRRTRHGV
LLTERGADYF AQVAPRLQAL EQDTLDAMSA QGPGGTLHLA AVPTFATRWL IPRLADLKRL
QPDLTIHIET STRPFMFADT VFDAALYAGT PEQVSQWAGT RALRLLAEQV VPVCSPHFLA
GQSSLSPAAI ADLPLLQQST RTEAWRRWFD AMGVSAPLAL SGPRFELFSM TAAAAAHGLG
LALVPRLLIE PELARGELVV ACERVLPSER AYYLVTPQAP DERPVINGFV RWLQKAAAQT
AETPDVETAS
|
|---|
| |