Gene Rfer_4021 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_4021 
Symbol 
ID3961700 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp4484857 
End bp4485954 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content69% 
IMG OID637918845 
Producthypothetical protein 
Protein accessionYP_525250 
Protein GI89902779 
COG category[S] Function unknown 
COG ID[COG3214] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCATCA CCCTGGACAC CCTGCGCCGC TACGCCGTGG CGCGTTCCCT CTTCACGCCC 
ACCACCCTGG CCCGCGCGAT CGAGCGCCTG GGCTTTGTGC AGGCCGACCC GATCCGCGCC
CCGGCGCGGG CGCAGGACCT GACCTTGCGC CACCGCGTCA AGGGCTATCA CGCGGGCGAT
CTGGAGCGGC GTTACGCCAG GCTCGGCATC GAAGAGGACT TCTTCGTCAA CTACGGCTTT
TTGCCGCGCG CCACGCAGGC GCTGATGCAC CCGCGCACGC CAACCTTGGC GTGGCCCAAG
GCACGTCTGG CGCAGGCCCA TGCCGTGCTG GACTTTGTGC GGGCGCACGG GGTGGTGCAC
CCGCGCGAGG TGGACGCGCA TTTTGCCCAT GGTGCGGCGC GCAACTGGTT TGGTGGCTCG
TCCAATGCCA GCACGCAGCT GCTCGACGAC ATGCACCACC GCGGCCTGCT GCGCATTGCC
GGGCGCATGA GTGGCGTGCG TACCTACGCC GCCTGCGAGC CACGGGCGCC CTTGGGGCCG
CTGGCCGATC CGACCCAGGC CATGGACGCG CTGGTCGATG TGATCGTGGG CAAGTACGCC
CCCTTGCCTG AACGCTCGCT CGGCGAGTTG ATCAGCCACC TGCGCGGCGG TGCCCCGCAA
TGGGCCGATC AACGCCAGGC GGCTTTCCAG CGCGCCAAGT TGCGGCTGGC CACAAGCCGG
GTGGATGGCG TGACCTGGTA TTGGCCTGCG GATGAGTCGC CGGCCTCACG CCGGTATGCG
CCCGGCGCGG TGGTGCGCCT GCTGGCGCCG TTTGACCCGG TGGTCTGGGA CCGTCGGCGC
TTCGAGCTTT TTTGGGGCTG GGCCTATCGT TTCGAGGCCT ACACGCCCGC CGCCAAACGG
GTGCGCGGCT ATTACGCGCT GCCGCTGTTG TGGCGTGACC AGGTCATTGG CTGGGGCAAT
GTGACGGTGA GTGGTGAGCG GCTCAAGGTT GATCTGGGCT ATGTGGCTGG CACGGCGCCG
CGTGAGGCGG CCTTTGGCCA AGCCCTGGCG CAAGAGTTGG CACGGCTGCA CACCTTTCTC
GCCTTGCCGG CAATTTGA
 
Protein sequence
MPITLDTLRR YAVARSLFTP TTLARAIERL GFVQADPIRA PARAQDLTLR HRVKGYHAGD 
LERRYARLGI EEDFFVNYGF LPRATQALMH PRTPTLAWPK ARLAQAHAVL DFVRAHGVVH
PREVDAHFAH GAARNWFGGS SNASTQLLDD MHHRGLLRIA GRMSGVRTYA ACEPRAPLGP
LADPTQAMDA LVDVIVGKYA PLPERSLGEL ISHLRGGAPQ WADQRQAAFQ RAKLRLATSR
VDGVTWYWPA DESPASRRYA PGAVVRLLAP FDPVVWDRRR FELFWGWAYR FEAYTPAAKR
VRGYYALPLL WRDQVIGWGN VTVSGERLKV DLGYVAGTAP REAAFGQALA QELARLHTFL
ALPAI