Gene Rfer_4012 details

Gene Information

• Locus tag: Rfer_4012
• ID: 3961691
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodoferax ferrireducens T118
• Kingdom: Bacteria
• Replicon accession: NC_007908
• Strand: +
• Start bp: 4477429
• End bp: 4478130
• Gene Length: 702 bp
• Protein Length: 233 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 637918836
• Product: nitroreductase
• Protein accession: YP_525241
• Protein GI: 89902770
• COG category: [C] Energy production and conversion
• COG ID: [COG0778] Nitroreductase

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCCAGT CCGCCACGCT CGCAGCACCC GCCAACACCG AACTCCCCAG CGCCCAGGAG 
ATGCCATCGG ACGCCATGAT CGAGTGCCTG CAGTGGCGCT ACGCCGCCAA AAAGATGGAC 
CCCGCCAAAG CGGTGCCCCA GAACAAGGTG GAGCGCATTC TGGAAGCGGC GCGCCTGGCA 
CCGACCTCCA GTGGCCTGCA GCCTTACGAG ATCATTGTGG TGACGAGCAA AGAAGTGCGC 
GAGCGCATCA AGCCCATCGC CTGGAATCAG GGCCAGATCA CCGATGGCTC GCATCTGCTG 
GTGTTTGCGG CGTGGGACAA CTACACGGTC GAGCGCATCA ACATGATGTT CGACCTGACC 
AACACCGTGC GCGGCTTTAA AAACGAGGGC TGGGAGAACT ACCGCAACAT GCTGCTGGGC 
ATGTACCCGC AGCGCGATGC CGAGGTGAAC CACCAGCATG CGGCGCGCCA GGCCTACATT 
GGCATGACCG CTGCCATGCT GGCCGCCGCC TTTGAAGAGG TGGACTGCAC CCCAATGGAA 
GGCTTCGACC CCAAGGCGAT GGGCGAGATT TTGAACCTGC GCGAGCGGGG CCTGCGCAGT 
GTGGCCATTT TGCCGCTGGG CTACCGCGAG GCCGACAAGG ACTGGCTGGT GAACCTGACC 
AAAGTGCGCC GCCCGCGCGA GCAGTTCATC ACGGAAGTCT GA 

 

Protein sequence

MTQSATLAAP ANTELPSAQE MPSDAMIECL QWRYAAKKMD PAKAVPQNKV ERILEAARLA 
PTSSGLQPYE IIVVTSKEVR ERIKPIAWNQ GQITDGSHLL VFAAWDNYTV ERINMMFDLT 
NTVRGFKNEG WENYRNMLLG MYPQRDAEVN HQHAARQAYI GMTAAMLAAA FEEVDCTPME 
GFDPKAMGEI LNLRERGLRS VAILPLGYRE ADKDWLVNLT KVRRPREQFI TEV