Gene Rfer_4000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_4000 
Symbol 
ID3961679 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp4462776 
End bp4463213 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content47% 
IMG OID637918824 
Producthypothetical protein 
Protein accessionYP_525229 
Protein GI89902758 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0236] Acyl carrier protein 
TIGRFAM ID[TIGR00517] acyl carrier protein 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGTTGGA TTCTAAAGCA CCCGAAATTT CAGAGACTGC CAAAACAGCC GGTTGAAAAT 
TGTCCGGCGA TGGATACATG CAAATGCCTT GCAACCATTG GTGTGCAGTG TGCAGTTCAC
CTGTTGCTGT ACCCCGTTCC GATACAATCC CGCACCAATG TCACTCCGGT AGCCAGCATG
TTATTTGATC AAATCAAGAA TTATTTAGTG GAGACGGCAG GTGTTGATCC CCAGCAATTT
GAGAATCCGG AATTGAAAAT TGCTGATCTG GAACTGGATT CCCTCGGTTT GATCGAAATG
TTATTTGAAG TCGAAGACAA ATACGGCTTC CAAATTCCGG ACCCCATGGT TTTTTTGCCT
ATGACCTTTG CCGGGATGGT GACTGCCATC GAAGCCATGG TGCAGGAACA CACCAAGCTC
CAAACCGCCC TCAACTGA
 
Protein sequence
MCWILKHPKF QRLPKQPVEN CPAMDTCKCL ATIGVQCAVH LLLYPVPIQS RTNVTPVASM 
LFDQIKNYLV ETAGVDPQQF ENPELKIADL ELDSLGLIEM LFEVEDKYGF QIPDPMVFLP
MTFAGMVTAI EAMVQEHTKL QTALN