Gene Rfer_3995 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_3995 
Symbol 
ID3961655 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp4457857 
End bp4458993 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content61% 
IMG OID637918819 
Producthypothetical protein 
Protein accessionYP_525224 
Protein GI89902753 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCACACC ACCCCCTGAG TACCCGCACC CAACGCACGG TGGACAGCCC CGCCGAATTT 
GCTGCCTGCC GCGACCGGTT TTTTACCCGC CCACTGTCCG ACACCATGCT GCGCTGGTGT
TTTCCTGAGC TGTCCCGGCA GGCCGTCGTC GAGCAGACCA ATGCCTTTCG CGGCACCGAG
GAGTTCCAGT TCGCCTACGT CAACCCGATG CTGCAGCGCA TTCTCAAAGA GACCTCACAG
GGCCTGAGCA TTTCCGGCCT GGACCAGCTG CCGACTGACC GCAAATTTCT CTTCATCTCC
AACCACCGCT GCATCGTCAT GGACGCTGCA CTGGTTTCAC TGAACCTGCT GTCCAGCGGG
CGGGGCACCT GCAAGGTGTG TGTGGGCGAC AACCTGATGG ACACCCCCGG TGTGGCCGAG
CTGATGCTGC TGCTCAATGG TGTGGTCATC AAGCGCAGCG GCGCACGCCG CGACGTGTAT
GCCAAGGCCC AGCAGACAGC CGCCTACCTG GCACGACAAA TTGAAGAGCA GCGCTATTCC
GTCTGGTTGT CGCAAAGTCC GGGCCGCACC AAAGACGGCA ACGACCACAC CGACCCGGCC
ATCATCAAGA TGCTGGCTCT GGCAGGCGAC AAAACCCGCG CCGATTTTGA GAAACTGCAC
ATTGTTCCGG TCGCCATCTC CTACGAATTC GAGCCCTGCG CCACCCACAA GGTGCGCGAA
ACACTGCTGC GGCTCCAGCA TGGCAAGTAC CACAAGGCCG CTGACGAAGA TGTGGCACAA
ATCCGGGACA GCGTGACTGC GAACAAAGGC CATATCCATC TGGCCTTCGG CAAGGAAATC
CGCCTGGACG GTGCACACAG CGCCGATGCA GTGCAAGAAG TCGCTGACAG GATCGATGCG
CAAATCTGGA GCATCTATCG CGCCTGGGAC AGCAACCGGA TCGCCCATGC CCTGCTGACC
CAAGACAACT GGGACCTGGA CACACCTTAC GCACAAGCAT TCCTGGGTCT GATTGCGAAT
CAGGTAGCGG AGTTGACCGC AATGGGGTTG CCCAGCGTCC CGGCGCGCGA AGCACTTCTG
CAACTGTATG CACAACCGGT CTTCAACGCA CGGCGCGCAG CCGCTTCCCG CACCTAA
 
Protein sequence
MPHHPLSTRT QRTVDSPAEF AACRDRFFTR PLSDTMLRWC FPELSRQAVV EQTNAFRGTE 
EFQFAYVNPM LQRILKETSQ GLSISGLDQL PTDRKFLFIS NHRCIVMDAA LVSLNLLSSG
RGTCKVCVGD NLMDTPGVAE LMLLLNGVVI KRSGARRDVY AKAQQTAAYL ARQIEEQRYS
VWLSQSPGRT KDGNDHTDPA IIKMLALAGD KTRADFEKLH IVPVAISYEF EPCATHKVRE
TLLRLQHGKY HKAADEDVAQ IRDSVTANKG HIHLAFGKEI RLDGAHSADA VQEVADRIDA
QIWSIYRAWD SNRIAHALLT QDNWDLDTPY AQAFLGLIAN QVAELTAMGL PSVPAREALL
QLYAQPVFNA RRAAASRT