Gene Rfer_3981 details

Gene Information

• Locus tag: Rfer_3981
• ID: 3961641
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodoferax ferrireducens T118
• Kingdom: Bacteria
• Replicon accession: NC_007908
• Strand: +
• Start bp: 4445478
• End bp: 4446122
• Gene Length: 645 bp
• Protein Length: 214 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 637918805
• Product: transmembrane protein
• Protein accession: YP_525210
• Protein GI: 89902739
• COG category: [S] Function unknown
• COG ID: [COG4648] Predicted membrane protein

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGACCCGCC TCACGCGGCT CCTGGTGTTT GCGGTAATTG CCATCGCAGG CGCTGCGTAC 
CTGGCTTTCA GCCACCTGTT GACCATCAAC GAACACCCCA GCTTGCTGAT GCTGGCACTG 
GGGGTGACCC CTCTGACCGT CATGGCCTTG CTCGCTGCCT GGCATTCCCG CATGCGCTGG 
TTGGCCCTGA CCCTGCTTGC GGCACTGGCG CTCACCGTGC TGTTGTATCT TGGTGCCCTG 
CGCAACCACG TCAACTGGCT GTATTTCATG CAACATGCCG GCGCCATGTC GCTGCTGGCC 
CTCACCTTTG GCAGCACACT GGGGCGTGGC GATGCCGAGG CTCTGTGCTC ACGTGTCACA 
CGCCTGATGC TGCCTGGCCC GGTTGATCCA ACCTACATGC GCTACACATG GAAGGTCACG 
CTAGTCTGGA CCGTGTACTT TGTGACCAGT GGGGTGGTGT CGGTAGGCCT GTTTTTCTGG 
GGGCCGATTA CCGTCTGGTC CTACTTTGCC AACCTGCTCA CTCCGGTCTT CGTCGGGCTG 
ATGTTTGTCA TTGAATACCT GGTGCGGGTG CGGGTACTGC CTGATCGCGC CCACTTCAGC 
ATCGCCCAGA CCATCCAGGC CTATCGTTCC TATGAGCAAC GCTGA 

 

Protein sequence

MTRLTRLLVF AVIAIAGAAY LAFSHLLTIN EHPSLLMLAL GVTPLTVMAL LAAWHSRMRW 
LALTLLAALA LTVLLYLGAL RNHVNWLYFM QHAGAMSLLA LTFGSTLGRG DAEALCSRVT 
RLMLPGPVDP TYMRYTWKVT LVWTVYFVTS GVVSVGLFFW GPITVWSYFA NLLTPVFVGL 
MFVIEYLVRV RVLPDRAHFS IAQTIQAYRS YEQR