| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3975 |
|---|
| Symbol | |
|---|
| ID | 3961635 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | - |
|---|
| Start bp | 4441265 |
|---|
| End bp | 4442254 |
|---|
| Gene Length | 990 bp |
|---|
| Protein Length | 329 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637918799 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_525204 |
|---|
| Protein GI | 89902733 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTCCAT TGAACACAAT CAAAACCCCA ACCCGAGCCT CTATCAAGCG CATTCTGGTT
TTGTCTTACT CGCAAACCGG GCAACTGGCC GAGATCACGC AGAGTATCGT AGCGCCGCTG
CAGCAATGTC CTCACTTCAG CGTTCACATC GAGACCTTGC GACCAGTCCA TCCTTATCCG
TTTCCGTGGC GATTTTTCAG CTTTCTTGAT GCCTTTCCTG AATCTGCCCA AATGGTGGCG
CCATCGTTGC ACCCTTTGTC CCTGACGGGT GACGAGGACT TCGATCTGGT GATCCTGCCC
TACCAGGTCT GGTTTCTCGC CCCGTCCTTG CCCATCACCG CCTTTCTCAA ACACCCGCTG
GCCAAAAAGC TGTTGATGGG CAAGCCGGTG GTGACCGTCA TTGCCTGTCG CAATATGTGG
ATGCTGGCGC AGGAGAAAAC GAAAAGTTTG CTGGCTGCCT GCGGTGCACG TTTGCTCGAC
AACGTGGCCA TGGTCGACCC CAGCTCCACG ATGACCACAC TGCTGACCAC ACCGGTGTGG
CTGCTCAGCG GCAAGCGTGA CTTGTTGCCG GGTTTGCCAC CGGCCGGGAT TGATGCGGCC
AGTATCAAAG CTGCGAGCCG CTTTGGCTTC GCGTTGCGTG ACGCCTTGCA AAACGACCAG
GAGCGAGGCA CGGCGCCCTT GCTCACCGGT TTGAATGCGG CAGATTCTGA TCCGAGTCTG
CTGTTCAGCG AGAAGGCGGG CACCCGAAGC TTCCACCTCT GGGGCAAGTT GCTGCGCACC
GTGGGGGAGC CGGGACAGTG GCATCGCCGT CCCTTTTTGC TTCTGTATGT ATGTTTTTTG
ATCACGCTGA TTCTGAGCGT CGTGCCCTTG AGTTTGCTCA TGCAGGCGGT ATTGCGGCCG
TTCTTGCAGC GGAAGATGGC ATTGCTCAAG CAGAAATTTG ACGCACCGTC GGGTTCCGGT
ACCGAGAGGA TGGCCTTGTA TGAGTTGTGA
|
|---|
| Protein sequence | MAPLNTIKTP TRASIKRILV LSYSQTGQLA EITQSIVAPL QQCPHFSVHI ETLRPVHPYP
FPWRFFSFLD AFPESAQMVA PSLHPLSLTG DEDFDLVILP YQVWFLAPSL PITAFLKHPL
AKKLLMGKPV VTVIACRNMW MLAQEKTKSL LAACGARLLD NVAMVDPSST MTTLLTTPVW
LLSGKRDLLP GLPPAGIDAA SIKAASRFGF ALRDALQNDQ ERGTAPLLTG LNAADSDPSL
LFSEKAGTRS FHLWGKLLRT VGEPGQWHRR PFLLLYVCFL ITLILSVVPL SLLMQAVLRP
FLQRKMALLK QKFDAPSGSG TERMALYEL
|
|---|
| |