| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3972 |
|---|
| Symbol | |
|---|
| ID | 3961632 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | - |
|---|
| Start bp | 4438758 |
|---|
| End bp | 4439750 |
|---|
| Gene Length | 993 bp |
|---|
| Protein Length | 330 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637918796 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_525201 |
|---|
| Protein GI | 89902730 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACACGA CCGTGACCCC TTTTCAGCAT CGTCACGCGG CACATTGCGA GAGCGGTGCC
GCCGCCAACC TGATGACGCA CCACGGCGCG AAGCTGTCTG AAGCGATGGC CTTTGGCCTG
TCTTCGGCCT TGTCCTTCGC CTACCTGCCG TTCATCAAAC TCACCGGCTT CCCGCTCATT
GCGTACCGCA TGCCGCCCAA GTTCATCCTC AAGGGCATGA GCAAACCGTT TCAGGCCCAC
TTTCGTTTTG AGACCTTCCG CGCCCCTGAA GCCGGTATGC GTCGGCTCGA CGAGCTGCTG
GCGCAAGGCC AAGTGGTCGG GTTGCAAACC TCGGTGTTCT GGCTGCCGTA TTTTCCGGAA
GACATGCGCT TTCATTTCAA CGCCCACAAC CTGCTGGTGT ACGGCAAAGA CGGCGATGAT
TACCTGATCA GCGACCCGGT GGCAGACCTG CCGCAACGCT GCGCCAGTGC CGACCTGCAG
CGTGCCCGGT TTGCCAAAGG GGCGCTCGCG CCCAAAGGCC TGCTGTATTT TCTGGAAGGC
GTCGGCCGCA CGGAAGTCAG AGCCGAAGCG GTTAAAAGTG CCATCAAAAA AACCGTACGC
ATCATGCTGG GCCCCATTCC CCTGATTGGC GTTCGAGGCA TGCGCATGCT GGCCAACCGG
GTGGCCAAGC TCGACACTTC GGAACACAGT CTCAACTATG TTGGCCACAT CGTGCGCATG
CAGGAAGAAA TCGGCACCGG CGGTGCGGGT TTCCGTTTTA TCTACGCGGC GTTCTTGCAG
GAAGCCGCGC AAATCACTGG CCTGACTGAA CTCTCCGTGC TGTCGGAGCG CCTGAATGAA
ACTGGCGACG GCTGGCGTGA ATTCGCCTTG AAAGCCGCGC GCATGATCAA AGGCCGTGAG
TCGTTCGAAC CGAAAAAACT GGCAGACATG TTGCGCGGTC AAGCCGAGCG CGAGACTGAA
TTTTTCCGGG CGCTCAAGAC CGCTGTCGCC TGA
|
|---|
| Protein sequence | MNTTVTPFQH RHAAHCESGA AANLMTHHGA KLSEAMAFGL SSALSFAYLP FIKLTGFPLI
AYRMPPKFIL KGMSKPFQAH FRFETFRAPE AGMRRLDELL AQGQVVGLQT SVFWLPYFPE
DMRFHFNAHN LLVYGKDGDD YLISDPVADL PQRCASADLQ RARFAKGALA PKGLLYFLEG
VGRTEVRAEA VKSAIKKTVR IMLGPIPLIG VRGMRMLANR VAKLDTSEHS LNYVGHIVRM
QEEIGTGGAG FRFIYAAFLQ EAAQITGLTE LSVLSERLNE TGDGWREFAL KAARMIKGRE
SFEPKKLADM LRGQAERETE FFRALKTAVA
|
|---|
| |