| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3966 |
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| Symbol | |
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| ID | 3961626 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 4433706 |
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| End bp | 4434746 |
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| Gene Length | 1041 bp |
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| Protein Length | 346 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637918790 |
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| Product | transketolase |
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| Protein accession | YP_525195 |
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| Protein GI | 89902724 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0022] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCACGA CCCGCAAACT CACCATGGCC CAGGCAATCT CGGAGGCCAT GGCGCAGGAA
ATGACACGCG ACCCCAATGT GTTCGTCATG GGCGAAGACA TTGGCGCCTA CGGCGGCATC
TTTGGCGCCA CCGGTGGCTT GCTCGACAAG TTCGGCCCGG ACCGCATCAT GGACACGCCG
ATCTCCGAGA CGGCCTTCAT CGGGACCGCC ACCGGTGCGG CCGCCGCTGG CCTGCGACCG
ATCGTGGAGC TGATGTTTGT CGACTTCTTT GGCGTCTGCA TGGACCAGAT CTACAACCAC
CTGGCCAAAA ACACCTACAT GGCCGGCGGC AACCTCAAGC TGCCGGTGGT GCTGACGACC
GCGATTGGCG GCGGCTACAA CGACGCCGCC CAGCACTCGC AGTGTCTGTA CGCCACCTTT
GCCCACATGC CGGGCCTCAA GGTCGTGGTG CCGTCGAACG CCTACGACGC CAAAGGCCTG
ATGATCCAGG CCATCCGCGA TGACAACCCG GTCATGTTCA TGTACCACAA GGGCATCATG
GGCCTGCCGT GGATGGCGTA TTTCGAGGGC AGCAGCAACG AGGTGCCCGA GGCGGGCTAC
ACCATCCCGT TCGGGCAGGC CAAGGTGGTG CGCGAAGGGC AGGACGCCAC CATCGTGACG
ATCAGCCAGA TGGTGCAGAA GGCGCTGCTG GCGGCGGACG AACTGGCGCG CGAGGGCATC
AACGCAGAAG TGATTGACCT GCGCACGCTG GTGCCGCTCG ACCGCGCTGC GGTGCTCAAG
TCCGTGGCCA AAACCGGACG GCTCCTGATC GCCGACGAGG ACTACTTGGG CTTTGGCCTG
ACCGGTGAAA TCTCGGCCAC CGTGGCGGAA AACCTGGACA CAGTGGTCCT GAAAGCGCCG
ATCAAGCGGC TCGCGCTGCC CAATGTGCCA ATCCCCTACA GCCGGCCGCT GGAACAGTTT
GTCATACCGC AGGTGAAGGG CATCGTTGAA GCGGTTCAAA AGCTGATGCA GGCGCGCATG
GCGGAAGGAG TCGCCGCATG A
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| Protein sequence | MSTTRKLTMA QAISEAMAQE MTRDPNVFVM GEDIGAYGGI FGATGGLLDK FGPDRIMDTP
ISETAFIGTA TGAAAAGLRP IVELMFVDFF GVCMDQIYNH LAKNTYMAGG NLKLPVVLTT
AIGGGYNDAA QHSQCLYATF AHMPGLKVVV PSNAYDAKGL MIQAIRDDNP VMFMYHKGIM
GLPWMAYFEG SSNEVPEAGY TIPFGQAKVV REGQDATIVT ISQMVQKALL AADELAREGI
NAEVIDLRTL VPLDRAAVLK SVAKTGRLLI ADEDYLGFGL TGEISATVAE NLDTVVLKAP
IKRLALPNVP IPYSRPLEQF VIPQVKGIVE AVQKLMQARM AEGVAA
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