Gene Rfer_3908 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_3908 
Symbol 
ID3961548 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp4364941 
End bp4365231 
Gene Length291 bp 
Protein Length96 aa 
Translation table11 
GC content57% 
IMG OID637918733 
Producthypothetical protein 
Protein accessionYP_525138 
Protein GI89902667 
COG category[L] Replication, recombination and repair 
COG ID[COG1343] Uncharacterized protein predicted to be involved in DNA repair 
TIGRFAM ID[TIGR01573] CRISPR-associated endoribonuclease Cas2 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.48914 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGGTAC TAGTTTGCTA CGACGTGAGT ACCGAAACCA GGGCCGGACG GCGGCGCTTG 
CGAAGGGTTG CCAAAGTTTG CGAAAGTACC GGGCAGCGGG TACAGAAATC GGTTTTTGAG
TGCCAGTTGG ACGTTGCTCA ATTTGAAGCA CTTGAGCGGG AATTGCTCGC AGAGATCGAC
GCGCAGCAAG ACTGCTTGCG CCTGTACCGC ATACCCGGTA CCCGCGGGTT TGAAGTTCTT
GAGCACGGCG CCTTCAAGGC GGTGGATTTT GATGGGCCGC TGGTGCTTTG A
 
Protein sequence
MLVLVCYDVS TETRAGRRRL RRVAKVCEST GQRVQKSVFE CQLDVAQFEA LERELLAEID 
AQQDCLRLYR IPGTRGFEVL EHGAFKAVDF DGPLVL