Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_3905 |
Symbol | |
ID | 3961545 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 4362373 |
End bp | 4363227 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637918730 |
Product | prophage antirepressor |
Protein accession | YP_525135 |
Protein GI | 89902664 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.356123 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATCT TCCCCGCTGA ATTCGACGGG AAAGCCATCC GCCGCGTGTA CGACGAAGAC ACGGAAACCT GGTGGTTTTC TGTGGTCGAC GTGGTGCAGG TACTGACGGA CAGCAATAAC GCCAGGCGGT ACTGGTCTGA CCTTAAACGC AAGCTCGCGC AAGAAGCGGG CTCAGAGCAA CCGTACGAGA AAATCGTACA GTTGAAATTG ACCTCGCCAG ACGGCAAGCA GCGCGAGACC GATGTCGCCA CCGCCGAAAC CCTGCTGCGC CTGGTGCAGT CTGTCCCCAG CCCCAAGGCC GAGCCCATCA AACTCTGGCT TGCCAAGGTC GGCTATGAGC GCATGCAAGA GCTGGCCGAT CCGGCCCTGT CGCTGGACCG TGCCCGCCAG ACCTGGCAAC AGCATGGGCG AAGCGACAAG TGGATTCAGC AACGCATGAC CGGGCAGGAA ACCCGCAACA AGCTCACCGA CTACTGGAGT GAGCACGACG TCAAAAAGGG CAGCGAGTTT GCCATCCTGA CCAACATCAT CCATCAGGAA TGGTCGGGCG TAAGCGTGGC GGAGCACAAA GATATGAAGG GCCTGAGCAG CCACAACTTG CGCGACCACA TGAGCGAGGC GGAACTCATT TTTACCGCCT TGGCTGAGTT GTCCACCCGC CAGATTGCAG AGAACGTGAA TGCCACCGGC GTGTCGCAAA ACAAGACTGC GGCCAAGGCC GGTGGCCGCA TCGCCGCCCA AGCCCGCAAC CAACTGGAAA GCCAGACCGG CAAGTCAGTG GTCACAGGAG CCAATTACCT GCCACCGGTT GCCACCAAGG CAGTCAAGGG CGCCAAGTCA CCGCGCAAAG CGTAA
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Protein sequence | MKIFPAEFDG KAIRRVYDED TETWWFSVVD VVQVLTDSNN ARRYWSDLKR KLAQEAGSEQ PYEKIVQLKL TSPDGKQRET DVATAETLLR LVQSVPSPKA EPIKLWLAKV GYERMQELAD PALSLDRARQ TWQQHGRSDK WIQQRMTGQE TRNKLTDYWS EHDVKKGSEF AILTNIIHQE WSGVSVAEHK DMKGLSSHNL RDHMSEAELI FTALAELSTR QIAENVNATG VSQNKTAAKA GGRIAAQARN QLESQTGKSV VTGANYLPPV ATKAVKGAKS PRKA
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