Gene Rfer_3905 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_3905 
Symbol 
ID3961545 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp4362373 
End bp4363227 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content60% 
IMG OID637918730 
Productprophage antirepressor 
Protein accessionYP_525135 
Protein GI89902664 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.356123 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATCT TCCCCGCTGA ATTCGACGGG AAAGCCATCC GCCGCGTGTA CGACGAAGAC 
ACGGAAACCT GGTGGTTTTC TGTGGTCGAC GTGGTGCAGG TACTGACGGA CAGCAATAAC
GCCAGGCGGT ACTGGTCTGA CCTTAAACGC AAGCTCGCGC AAGAAGCGGG CTCAGAGCAA
CCGTACGAGA AAATCGTACA GTTGAAATTG ACCTCGCCAG ACGGCAAGCA GCGCGAGACC
GATGTCGCCA CCGCCGAAAC CCTGCTGCGC CTGGTGCAGT CTGTCCCCAG CCCCAAGGCC
GAGCCCATCA AACTCTGGCT TGCCAAGGTC GGCTATGAGC GCATGCAAGA GCTGGCCGAT
CCGGCCCTGT CGCTGGACCG TGCCCGCCAG ACCTGGCAAC AGCATGGGCG AAGCGACAAG
TGGATTCAGC AACGCATGAC CGGGCAGGAA ACCCGCAACA AGCTCACCGA CTACTGGAGT
GAGCACGACG TCAAAAAGGG CAGCGAGTTT GCCATCCTGA CCAACATCAT CCATCAGGAA
TGGTCGGGCG TAAGCGTGGC GGAGCACAAA GATATGAAGG GCCTGAGCAG CCACAACTTG
CGCGACCACA TGAGCGAGGC GGAACTCATT TTTACCGCCT TGGCTGAGTT GTCCACCCGC
CAGATTGCAG AGAACGTGAA TGCCACCGGC GTGTCGCAAA ACAAGACTGC GGCCAAGGCC
GGTGGCCGCA TCGCCGCCCA AGCCCGCAAC CAACTGGAAA GCCAGACCGG CAAGTCAGTG
GTCACAGGAG CCAATTACCT GCCACCGGTT GCCACCAAGG CAGTCAAGGG CGCCAAGTCA
CCGCGCAAAG CGTAA
 
Protein sequence
MKIFPAEFDG KAIRRVYDED TETWWFSVVD VVQVLTDSNN ARRYWSDLKR KLAQEAGSEQ 
PYEKIVQLKL TSPDGKQRET DVATAETLLR LVQSVPSPKA EPIKLWLAKV GYERMQELAD
PALSLDRARQ TWQQHGRSDK WIQQRMTGQE TRNKLTDYWS EHDVKKGSEF AILTNIIHQE
WSGVSVAEHK DMKGLSSHNL RDHMSEAELI FTALAELSTR QIAENVNATG VSQNKTAAKA
GGRIAAQARN QLESQTGKSV VTGANYLPPV ATKAVKGAKS PRKA