| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3898 |
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| Symbol | |
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| ID | 3961519 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 4351729 |
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| End bp | 4353390 |
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| Gene Length | 1662 bp |
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| Protein Length | 553 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637918723 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_525128 |
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| Protein GI | 89902657 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGACAG CTCAATTCCC CGAACTGGAT GCGCCCCTGC ACGACTACCT GCGTGCTCAC
GCCCGAACGC AACCCGACAA AGCCGCTTAC CTGTGGTACG GCCACGGCAT CAGCTACGCC
GAGCTCGACC GCGCCAGTGA TGCCTTTGCG GCCCGGCTGG CGGCGCTGGG GGTCAAAAAG
GGCGACCCAG TGGCGCTGTT TCTGAACAAT TGCCCGCAGT ACGTGATGGC GCATTACGCC
ATCCAGAAAC TCGGCGCCAT CGTCTGCCCG TGTGGGCCGC TCAACAAGGA GCACGAGTTG
CTCTACCAAC TGGGCGACTT GCAGGCGCGC GTGATCGTCG CCGCCGACAA CCTGCTGCCG
GTGGTGGCGC AGGTGCGCAG CCAGACCGCG CTGACCCATG TGTTTGCCGT GCGTTATGCC
GACTTGCTGC CCGAGCAGCC GAGCGTGACC GTCCCCGCTG AATTGCTGGC GATGAAAGCC
CAGCCCACGC AACTGCCGGC CGATGTGGAA GACTTCATGG CGGCCACCCA GGGCACGGCC
AGGCCGCCGC CGGTGGCGCT GGCCATGGAT GACGTCGCGC TGATGACCTA CACCTCGGGC
ACCACCGGCT TGCCCAAGGG CGCCATGCTG ACTTATGGCA ACGCCTTGTA CAAATCGGCC
GCGGCGGCCA ACTGCAATGG CGTCGGCCAC GATGATGTGT TGCTGGCGAT TGCGCCGCTG
TATCACATTG CGGGCATGGT GATGGGCATC AACGTCACGA TGTTCACCGG TGCGACCACC
GTGTTGATGT ACCGTTTCGA CCCGCTGGCG GTGCTGCAGG CGATTGAGCG CCACCGCGTG
ACCTGGTGGT ACAGCATAGC GCCGATGAAC GTGTTTGCCA TGCAGGTGCC TACTGCCAGG
GCGTTCGATT TGTCGAGCTT GCGCATGAAC CCGGTGACCA GCTTTGGCGT CACCTTGACC
GAGGCACTGG CCCGGCAATG GCAGGCCCTG GCACCCCACT GCGAGTCGTT CGAGGCGGCC
TACGGCTTGA GCGAAACCCA CACGGTCGAC ACCTACATGC CGCACGATGC AATCCGCTGG
GGCACGCAGG GCAAGGCGAT TCCGGGCAAC GAGATCCGCA TCCTGGACGC CGGGTCGGGC
CGTGTCTGCG CCAGCGGCGA GGTCGGCGAG ATCGTGCTGC GCAGCGCCGG CGTCTTCAAG
GGCTACTGGA ACAAGCCCGA GGCCACGGCG CAGACGTTGC GCGACGGCTG GGTCCACACC
GGCGACATGG GCAAGCTGGA CGCCGATGGC TACCTGACCT TCATCGGCCG CTTCAAGGAG
ATGATCAAGG TCTCGGGCTA CAGCGTGTTT CCCGAAGAAG TGGAAACGAT TTTGATCAAG
CACCCGGCCA TTGCCCAGGC CGCCGTGATT GGTGTGCCCG ACCCCGACAA GGGCGAAATG
GTGAAGGCTT TTGTCGTGCT GAAGCCGGGC CAGAGCGCCA GCGCCGCGGA CATTGTGGCC
TGGTCGCGCG CCAACATGGC CACCTACAAG GCACCCCACG ACGTGCAGCT GATGGCCGCC
CTGCCGACCA CCGGCGCGGG CAAAGTGTTG CGCCGCCTGC TGAAAGACCC GGCGCCATCC
GCCGACCTCA CGCCACCCGC CACAAAGCAA ACCCATGACT GA
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| Protein sequence | METAQFPELD APLHDYLRAH ARTQPDKAAY LWYGHGISYA ELDRASDAFA ARLAALGVKK
GDPVALFLNN CPQYVMAHYA IQKLGAIVCP CGPLNKEHEL LYQLGDLQAR VIVAADNLLP
VVAQVRSQTA LTHVFAVRYA DLLPEQPSVT VPAELLAMKA QPTQLPADVE DFMAATQGTA
RPPPVALAMD DVALMTYTSG TTGLPKGAML TYGNALYKSA AAANCNGVGH DDVLLAIAPL
YHIAGMVMGI NVTMFTGATT VLMYRFDPLA VLQAIERHRV TWWYSIAPMN VFAMQVPTAR
AFDLSSLRMN PVTSFGVTLT EALARQWQAL APHCESFEAA YGLSETHTVD TYMPHDAIRW
GTQGKAIPGN EIRILDAGSG RVCASGEVGE IVLRSAGVFK GYWNKPEATA QTLRDGWVHT
GDMGKLDADG YLTFIGRFKE MIKVSGYSVF PEEVETILIK HPAIAQAAVI GVPDPDKGEM
VKAFVVLKPG QSASAADIVA WSRANMATYK APHDVQLMAA LPTTGAGKVL RRLLKDPAPS
ADLTPPATKQ THD
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