Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_3897 |
Symbol | |
ID | 3961518 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 4350975 |
End bp | 4351616 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637918722 |
Product | TetR family transcriptional regulator |
Protein accession | YP_525127 |
Protein GI | 89902656 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCACAT CCCCCTCCCG GCCCCGCACC CGCCGGCAAA AAGCCGTCAC GCCCGGCACG GACGAAAAAC GCGAGCGCAT CCTCAAGGTG GCCGAGCGCC TGTTCGCGGC CCAGGGTTAC GCCAACACCA CGATGGCGCA AATCGTGCGC GAGTTGGAGG TCAGCAAGCC CTTTGTGTAT TACTACTTTC ACAACAAGCA GGAGATTTTC GAGACCCTCT CCTGGCGCCC GGCGGTCGCG TGCTTCACCA CGATGGACTT TGCCCCGGAT GACCCGCGCC CGGCGCATGT CAAGGTGACC GAAGGGCTGG AGCGCCTGAT CCGCGCCACC ATCACGCATT ACCCGGCGGC TTTTTTTGCT TACCGCGAAC CTCAGGTGTA CCGCCCGGAG TACCTGGCCG CACAGAAGAA ACTGGCAAAT CACTTTTATG AGCGCCTGTG CTCGCTGCTG GAGCAGGGGC GACGCGAGGG CAGCTTCGAC TTCACCGAAA CACGCATCAC CGCGCAGGCG GCATGCAGCC TGCCCGGCTT TCTCTACAAC TGGTACCGAC CCGACGGCCG CCTGGATCCT GACGCCATGG TGCGCGAGCT CTCCAAACTG GCCTGGCGCG TCATCGGCCT GCGTGACACC GGTGCAGGTT GA
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Protein sequence | MSTSPSRPRT RRQKAVTPGT DEKRERILKV AERLFAAQGY ANTTMAQIVR ELEVSKPFVY YYFHNKQEIF ETLSWRPAVA CFTTMDFAPD DPRPAHVKVT EGLERLIRAT ITHYPAAFFA YREPQVYRPE YLAAQKKLAN HFYERLCSLL EQGRREGSFD FTETRITAQA ACSLPGFLYN WYRPDGRLDP DAMVRELSKL AWRVIGLRDT GAG
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