Gene Rfer_3857 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_3857 
Symbol 
ID3961459 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp4305877 
End bp4306599 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content65% 
IMG OID637918682 
Producthydrogen dehydrogenase 
Protein accessionYP_525087 
Protein GI89902616 
COG category[C] Energy production and conversion 
COG ID[COG1034] NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGATG ACGTGAGTCC CACCCAGAGC TTCTCGCTCG ACGGCGACGA CCTGCCGTTT 
GCGTCCGGGG AGACCATTTT GCAGGCCGCC ACGCGCGCCG GGCGCTACAT CCCGCACCTG
TGCTGGCACC CGGACTTTGC GGCGCATGGC TCGTGCCGGA TCTGCAGCGT CAAGGTGAAC
GGCCGCGTCG GTGCCGCCTG CACCGTGCAA GCGGCGGCCG GGCTGGAGGT CGAAAGCAAT
ACGCCCGAGA TGAACCGCCA GCGCAAGACG CTGCTGCAGA TGTTGTTCGT TGAGGGCAAC
CACTTTTGCC CCAGTTGCGA GAAAAGCGGC AATTGCCTGC TGCAGGCCAC CGCCTACCAG
ATGGGCATGG AAGGGCCGCA TTTTGAGGAG TTCTACCCCA ACCGCCCGGT GGACGCCAGC
CACCCCGACA TCCTGCTTGA CTTCAACCGC TGCATTTTGT GCGAGTTGTG CGTGCGCGCC
AGCCGCGAGG CCGATGGCAA AAACATCTTT GCCATCGGCG GCCATGGCAT GGGCACCCAC
CTGCTGGTCA ACAGCGCCAG CGGCCAGTTG GGCGACACCG CGATGAGCCT GGATGACCGC
GCGGCCCACA TCTGCCCGGT GGGCGTGATC CTGCCCAAGC GGCGTGGCTT TGTGATCCCG
ATCGGCCAGC GGCGTTTCGA TTTGAAGCCG GTGTCGCAGC AGCGCGAAGG TGATGCCACA
TGA
 
Protein sequence
MTDDVSPTQS FSLDGDDLPF ASGETILQAA TRAGRYIPHL CWHPDFAAHG SCRICSVKVN 
GRVGAACTVQ AAAGLEVESN TPEMNRQRKT LLQMLFVEGN HFCPSCEKSG NCLLQATAYQ
MGMEGPHFEE FYPNRPVDAS HPDILLDFNR CILCELCVRA SREADGKNIF AIGGHGMGTH
LLVNSASGQL GDTAMSLDDR AAHICPVGVI LPKRRGFVIP IGQRRFDLKP VSQQREGDAT