Gene Rfer_3844 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_3844 
Symbol 
ID3961446 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp4291204 
End bp4292304 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content63% 
IMG OID637918669 
Productbeta-lactamase-like 
Protein accessionYP_525074 
Protein GI89902603 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAACCAC CTGAACCCCC CGGCACAAAT CCACACGCCG ATAAACTCGA ACAGCAATTG 
CACTACCCGC TGGGCCACAC CCTGCCCACG CCCGGCACGG CTGTCACGGT GGCGCCGGGC
GTGAAGTGGC TGCGTATGGG CTTGCCGTTT GCGCTCAATC ACATCAACCT CTGGCTCTTG
CGCGATGAAA TCGACGGCCA GCCGGGCTGG AGCGTGGTCG ACTGCTGCAT CAGCTCCGAG
CCGGCCAAGG CGCAATGGGA GCAGGTCTTT GCCAACGAAC TCGACAGTCT GCCGATCCTG
CGCGTGATCG TGACCCACAT GCACCCGGAC CATATTGGCC TGGCGCACTG GCTGTGCGAG
CGCTGGCAGG TGCGCTTGTG GATCAGCGCC ACCGATTTCG GCCTGGCACG CATCGGCAGC
CAGGGCCCGA ACGGTTTCAG CAGCGACGCG GCGGCCGCGT TTTTTGCCTT GCATGGCTTG
AGCGACCCGG ACTCCCTGGA AAAAATCAGG GGCCGCGGCA GCTATTTTTC GACCCTGGTG
CCTGCGGTGC CGCGCCAGTA CCGGCGCCTG CAGGACAGCG ACGTGCTCAC CATTGGCGGG
CGCGCCTGGT TGTGCGTCAG CGGCTACGGC CATGCGCCCG AGCACATCTC GCTGTACTGC
GCAGAATTGC AGGTACTCAT CGGCGGCGAC ATGATGCTGC CGCGCATCTC CACCAACGTC
AGCGTCTACG ACCAGGAACC CGAATCGAAC CCGCTCAGGC AGTTCCTCGA TTCCATCGAC
AAATTCAAAG CCCTGCCCGC CCAGACGCTC ACCCTGCCGG CCCACGGCAA GCCCTTTACC
GGCTTGCATG CGCGCATTCA ACAATTACAC GACCATCATG ACGAGCGGCT GCTTGAAGTG
ATGCAGGCCT GCACCGTCAA GCCGTGCAGC GCCGCCGAGC TGCTGCCGCT GCTGTTCAAA
CGCGCGCTGG ACCTGCATCA GACCACCTTT GCCATGGGTG AGTCGATTGC CCACCTGCAT
GCGCTGTGGT TTGAGGGGCG GTTGCAGCGC AGGCTCGGCG ACGATGGGGT TTATCGCTTT
GGGGCTGGCG CTGGCATTTG A
 
Protein sequence
MKPPEPPGTN PHADKLEQQL HYPLGHTLPT PGTAVTVAPG VKWLRMGLPF ALNHINLWLL 
RDEIDGQPGW SVVDCCISSE PAKAQWEQVF ANELDSLPIL RVIVTHMHPD HIGLAHWLCE
RWQVRLWISA TDFGLARIGS QGPNGFSSDA AAAFFALHGL SDPDSLEKIR GRGSYFSTLV
PAVPRQYRRL QDSDVLTIGG RAWLCVSGYG HAPEHISLYC AELQVLIGGD MMLPRISTNV
SVYDQEPESN PLRQFLDSID KFKALPAQTL TLPAHGKPFT GLHARIQQLH DHHDERLLEV
MQACTVKPCS AAELLPLLFK RALDLHQTTF AMGESIAHLH ALWFEGRLQR RLGDDGVYRF
GAGAGI