| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3761 |
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| Symbol | |
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| ID | 3961110 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 4195805 |
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| End bp | 4196899 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637918587 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_524992 |
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| Protein GI | 89902521 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTTCAC GTACATTACC TGACTTTCTT TGGTCCGTTC GACGCGCGAT GCCGTGGCTC
GGTGCGTTTG TCATGTCTGT CGCCGCCGCG CAGGGCGGGG TTCAGGTGCC CGTCGTTCCC
GCGCAGGTGA AGTCGGTCGG AACCGGGTTT GAGCTCGATG GTGTGGTTCA GCCCGTCAAG
CAGAGCACCA TTTCGGCGCA GGCGAGCGGT CGTATTGCGA CTTTGCTGGT CAAGGCCGGT
GACAAAGTGC GTGCCGGTCA GGTGCTGGCC ACCATTGACG ACCGCGAGGC GCAAACCGGT
GTGCAGAGTA GCCAGGCGCA AGTGGCGCAG GCGCAAGCCG GGCTGCACAA CGCCCAAGCC
AACTTTGATC GCACGCGTGA TTTGCGCGCC AAGGGATTTG TCAGTGCCGC CGCACTCGAT
ACGGCTGAAG CGCAGCTCAA GGGCGCGCTG GCCGGGCGCG ATCAGGCTGG CGCTGGCGCC
CGCCAATCGG CATTGGCGCA GGGCTTTACC CGCGTCACCG CGCCGTTTGA GGGCTGGGTG
CTGCAGACGC ATGCTGAAGC GGGCGACCTG GCTGTGCCGG GCAAACCCTT GCTCACGCTG
TACGCCCCGC TGCCGATGCG GGTGGTGGTG CAGGTCCCGG TGTCGCGCTC GGGTGCGGCG
CGTGCGGCCG GTGCGGTTGA ATTGTTGTTG CAAGACGGTG TCGGCGCCGG GCAATGGCAG
CGTCCGGTGT CCATCAGTAC TGTGCCCACG GCCGATCCGG TTTCACAAAC GATTGAGTGG
CGTCTTGAAT TGTCTGCCGA GGCGGCCAAA ACCTTGCTGC CGGGTCAGCA GGTGCGGGTG
CGTTTTGCCG GGGGACAGGC CGATCGCATG CTGGTGCCCA GCACTGCCGT TCTGCGGCGT
GGCGAATTGA CGGCTGTCTA TGTGGTGTCA GGCACGGGCT TTGTGCTCAA GGCGGTGCGT
CTTGGTGCTG ATCACGGTGC CGAGGGGGTT GAGGTGGTGG CGGGCCTGAC GGCGGGTGAC
CGCGTGGCAC TGGAACCGGT CAAAGCGGGT TTGGCAGGCG CGCAAGCCGT GGCACCGTCC
GCCGTGACCA AGTGA
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| Protein sequence | MSSRTLPDFL WSVRRAMPWL GAFVMSVAAA QGGVQVPVVP AQVKSVGTGF ELDGVVQPVK
QSTISAQASG RIATLLVKAG DKVRAGQVLA TIDDREAQTG VQSSQAQVAQ AQAGLHNAQA
NFDRTRDLRA KGFVSAAALD TAEAQLKGAL AGRDQAGAGA RQSALAQGFT RVTAPFEGWV
LQTHAEAGDL AVPGKPLLTL YAPLPMRVVV QVPVSRSGAA RAAGAVELLL QDGVGAGQWQ
RPVSISTVPT ADPVSQTIEW RLELSAEAAK TLLPGQQVRV RFAGGQADRM LVPSTAVLRR
GELTAVYVVS GTGFVLKAVR LGADHGAEGV EVVAGLTAGD RVALEPVKAG LAGAQAVAPS
AVTK
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