| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3695 |
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| Symbol | |
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| ID | 3962347 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 4126786 |
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| End bp | 4129020 |
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| Gene Length | 2235 bp |
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| Protein Length | 744 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637918521 |
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| Product | glycine--tRNA ligase |
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| Protein accession | YP_524926 |
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| Protein GI | 89902455 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0751] Glycyl-tRNA synthetase, beta subunit |
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| TIGRFAM ID | [TIGR00211] glycyl-tRNA synthetase, tetrameric type, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.641842 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGACTC AAAACCTTCT CGTTGAATTG TTTGTCGAAG AGCTGCCGCC CAAGGCGCTC
AAGAAGCTGG GCGAGGCGTT TGCCCAACAG ATTTACGCGT CTCTTAGTGA TCAATGGCTG
ATCTCGATGC CTGGAACCAT GGCACAAGAT CCTGACCAAG CTGATCCACC TGCGATGGAT
GTTTTTGCGT CGCCAAGGCG CTTGGGTGTG CTTATCCGGT CAGTTTTACT AAAGGCACCT
GACACGCAGA AGCTGGTGAA ACTCATGCCC GTCACCGTGG GGCTTGACGC CGCCGGCCAG
GCCACCTCGG CGCTGCTCAA GAAATTGCAG GCGCTCGGTG CGGATCTGAC CGACCCGGTT
GCGGCCGTGG CTGCGCTCAG GCGAGCACCG GACGGCAAGG TCGAGGCCTT GTTTTATGAC
AGCCTGGTCA CTGGCGCCAC GCTCGACGCG GGCCTGCAAA AGGCGCTGGA AGAAGCCATT
GCCAAGCTGC CCATCCCCAA GGTCATGAGC TACCAGCTGG AGACCGATTG CGAGCTGCCC
GGCTGGAGCA GCGTGAATTT TGTGCGCCCG GCGCACGGTC TGGTGGCGCT GCGCGGCAGC
ACCGTGGTGC CGGTCAAGGT GCTCGGGCTC AAGGCTGGCA ACAGCACACA AGGTCATCGT
TTTGAAGCGA AGGTATCACC GGTCGTGATT GCGGACGCCG ACAGCTATGC CGCCACGCTG
GAGCAGGACG GCGCGGTGAT TGCCGGCTTC GAGCAGCGCC GCTTTGCCAT CGTGCAACAG
CTCGCGCAAG CCGCCGAGCG CCTGGGACCG AGCTACCGGG TGCTGATGGA CGAGGCCTTG
CTCGACGAAG TCACCGGTCT GGTCGAGCGC CCGAACGTGC TGGTCTGCGC GTTCGACGCG
CAGTTCCTCG ACGTGCCGCA GGAGTGCCTG ATTCTGACGA TGAAGGCCAA CCAGAAGTAC
TTCCCGCTGC TCGACGCCGC CGGCAAGCTG ACCAACCAGT TCCTGGTGGT CAGCAACATC
AGCCCGCTTG ATGCCAGTGC AGTGATTGGC GGCAACGAGC GCGTGGTGCG CCCGCGCCTG
GCCGACGCCA AGTTCTTCTT TGACCAGGAC CGCAAGAAGA CGCTCGCATC GCGTGTCGAA
GGACTCTCCA AGGTCGTTTA TCACAACAAG CTGGGTACGC AGGGTGAACG TACGGAGCGC
GTGCAGTCCA TTGCCAGCGC CATTGCCCGT CAGCTCGCAG ACGCTGGTGT AGCGGATGCC
TTCGACGGCA ACGCAGACAA CGCGGCTATG TTGGCCAAGG CCGACTTGCT GACCGACATG
GTGGGCGAAT TTCCCGAGCT GCAGGGCATC ATGGGTGGCT ACTACGCGCG CCATGATGGC
CTGCGTGAGG ACATTGCCTT CGCCATTGAA GACCATTACA AGCCGCGCTT TGCCGGGGAT
GAATTGCCGC GCAACACCAC CGGCCTGGTG GTGGCATTGG CCGACAAGCT GGAAACACTG
GTCGGTATGT TCGGCATCGG CAACGTGCCG ACCGGCGACA AGGATCCCTA TGCGCTGCGC
CGTCACGCGC TGGGCGTGAT CCGCATGCTG GTCGAGAAGG AATTGCCGCT GGACCTCAAT
GGCCTGCTGG CCTGTGCCTT TGAGGAGCCT CGATGGGGCA CTGCTTTCAA GGCCGGCACC
GACCTTGGTG CTGCTGCGCC CAGCGTCTAC CAGAAGTTTG ACGCCGCACG ACCGTTGGCA
GACTTCATTT TTGACCGCCT CGCCGGCTCC CTGCGCGAGC AGGGCTACAG CGCGCAGGAA
GTCGATGCCG TGCTGGCGCT CCAGCCGCAG CGCCTGGGCG ACATTCCCAA GCGCCTCGCC
GCCGTGCGCG CCTTTGCCGC CTTGCCTGAA GCGCCCGCGC TGGCTGCCGC CAACAAGCGC
ATCAGCAACA TTCTGAAAAA GGCGCCCGAC GTGGACCCCC ATGTCAGTGA GGTCTTGCTG
ACGGAGCCGG CGGAACTGGC CCTGTTTGCC GCGATGCAGT CGCTGGCGCC GCTGGCGAAC
GCGCAGTTTG AAGCGCTCGA CTACACCGCT TCGCTGCAAA CCCTGGCCGC ACTGCGCGCA
CCGGTGGATG CGTTTTTCGA CAGCGTGCTG GTCAATGCCG AGCAACTGGA CTTGCGCCTG
AACCGCCAGG GCTTGCTCAA AAGCCTGCAC AGCGCCATGA ACCGCGTGGC CGACCTGGCG
CGGCTGGCGG CCTGA
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| Protein sequence | MTTQNLLVEL FVEELPPKAL KKLGEAFAQQ IYASLSDQWL ISMPGTMAQD PDQADPPAMD
VFASPRRLGV LIRSVLLKAP DTQKLVKLMP VTVGLDAAGQ ATSALLKKLQ ALGADLTDPV
AAVAALRRAP DGKVEALFYD SLVTGATLDA GLQKALEEAI AKLPIPKVMS YQLETDCELP
GWSSVNFVRP AHGLVALRGS TVVPVKVLGL KAGNSTQGHR FEAKVSPVVI ADADSYAATL
EQDGAVIAGF EQRRFAIVQQ LAQAAERLGP SYRVLMDEAL LDEVTGLVER PNVLVCAFDA
QFLDVPQECL ILTMKANQKY FPLLDAAGKL TNQFLVVSNI SPLDASAVIG GNERVVRPRL
ADAKFFFDQD RKKTLASRVE GLSKVVYHNK LGTQGERTER VQSIASAIAR QLADAGVADA
FDGNADNAAM LAKADLLTDM VGEFPELQGI MGGYYARHDG LREDIAFAIE DHYKPRFAGD
ELPRNTTGLV VALADKLETL VGMFGIGNVP TGDKDPYALR RHALGVIRML VEKELPLDLN
GLLACAFEEP RWGTAFKAGT DLGAAAPSVY QKFDAARPLA DFIFDRLAGS LREQGYSAQE
VDAVLALQPQ RLGDIPKRLA AVRAFAALPE APALAAANKR ISNILKKAPD VDPHVSEVLL
TEPAELALFA AMQSLAPLAN AQFEALDYTA SLQTLAALRA PVDAFFDSVL VNAEQLDLRL
NRQGLLKSLH SAMNRVADLA RLAA
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