| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3670 |
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| Symbol | |
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| ID | 3964038 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 4089023 |
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| End bp | 4090723 |
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| Gene Length | 1701 bp |
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| Protein Length | 566 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637918486 |
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| Product | FAD dependent oxidoreductase |
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| Protein accession | YP_524901 |
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| Protein GI | 89902430 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0578] Glycerol-3-phosphate dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.234288 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTCACCC CAACGCAGCC ATTATTCACA CAGCGGGCCG AATTGATCAG CCGTCTGGCC
GCGCCGCGCC ACTATGACAT CGCCATCGTG GGCGGCGGCG CGACGGGCCT GGGCGTGGCG
CTGGACGCAG CGGCGCGCGG CTTTAGCGTG GTGCTGATCG AGTCGCACGA CTTTGCCAAG
GGCACCTCCT CGCGCGCCAC CAAGCTGGTG CATGGCGGCG TGCGCTACCT GGCGCAGGGC
AATATTGGGC TGGTGCGCGA AGCGTTGCGC GAGCGCACCA CACTGCTGCA CAACGCGCCT
TATCTGGCAC AGCCGCTGGC GTTTGTGATG CCGTCCTACA AGTGGTGGGA GATGCCTTTT
TATGGCATTG GGCTCACCCT GTATGACGCC TTGGCGGGCA AAGCCGGCCT GGGACGTACC
GAATTTTTAA GCCGCGCCAA GACACTGGCG CTGTTGCCCG CGGCGCAGCC ACAGGGGCTC
AAGGGCGGCG TCAAGTACTG GGACGGCCAG TTCAACGACG CACGCCTGGC ACTGGCGCTG
GGCCGCACGG CGGCGGCGCG TGGTGCGCTG CTGGTGAACT ACTGCCGCGC GCTTGATTTG
TTTTACCAGG AGGGCAAAGT CGCCGGACTG GTCTGTGAAG ACACCCTCAC CGGCCAGACC
TACCGCATCC AGTCGCGCTG CGTCGTCAAC GCCGCCGGGG TCTGGGTCGA TGAGCTGCGC
CAGAAAGACG GCGCCGCCAA TGGTGCCGAT GGCCGGCGGC CCACCGAACC GATGGTGGCA
CCCAGTCAGG GCGTGCACAT GGTGGTGGAT CGTGACTTTT TGGGTGGTGA TACCGCCTTG
ATGGTGCCCA AAACTGCCGA TGGCCGTGTC TTGTTTGCCG TGCCCTGGCT GGGCAAGGTG
ATTCTCGGCA CCACCGACAC GCCACGCCAT GACCTGGCGC GTGAGCCGCT GGCGTTCAAG
GAAGAAGTTG ATTTTATTCT GACCGAATCG GCGCGTTATC TGCGTCGTGC GCCCAAACGC
GCGGATGTCA AGAGTATCTG GGTCGGCTTG CGCCCGCTGG TCAAGCCGCC AGACGACGAG
GGCGACAACA CCAAGGGCTT GAGCCGCGAG CACACGGTGC TGGTCAGCCG CAGTGGGCTG
GTCACGGTGA CCGGCGGCAA GTGGACCACC TACCGCGCCA TGGCCGAAGA CGTGCTGGCG
CAGTGCGCCG CCAAGTCTCT GATCGACGCG CGTGCGGCCG GCGTCACCGT CGATTTGAAA
CTGGTCGGCG CCGATGAGAC GCCGGGCCAG GCACACTCCA TCAGTCAGCC GCCTGGCCTG
CATTCGTATG GCAACGAACA GGCCCTGGTG ATGAGCCTGC CCGGCGCGCA ATCCGTGTTG
TGCGACGGCT TGACCGAAGC CATGGTGCGC TTCGCGGCGC GCTACGAGTA TGCGATCACC
GTCGAAGACG TCCTGGCGCG TCGTTCCCGC TTGCTGTTTC TCGATGCCCG CTTGGCCAGC
TCCCTGGCGG CGCAGGTGGG AGGCATTCTG TTGCAGGAGA CCGGGCTCGA CCCGCAGGTT
GATGTGTTCA CCGAGCTGGC GCAGCACTAT TTGTGTTTGC CGGCATCGTG CGAACAGGTC
GATCAGCCAC GCTCTTTGAG TGCCAATGCG ACAGAAGCGC AAGTCCTTGC TGATCCGCGT
CAAACGTCGC AGCGGGCATA G
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| Protein sequence | MVTPTQPLFT QRAELISRLA APRHYDIAIV GGGATGLGVA LDAAARGFSV VLIESHDFAK
GTSSRATKLV HGGVRYLAQG NIGLVREALR ERTTLLHNAP YLAQPLAFVM PSYKWWEMPF
YGIGLTLYDA LAGKAGLGRT EFLSRAKTLA LLPAAQPQGL KGGVKYWDGQ FNDARLALAL
GRTAAARGAL LVNYCRALDL FYQEGKVAGL VCEDTLTGQT YRIQSRCVVN AAGVWVDELR
QKDGAANGAD GRRPTEPMVA PSQGVHMVVD RDFLGGDTAL MVPKTADGRV LFAVPWLGKV
ILGTTDTPRH DLAREPLAFK EEVDFILTES ARYLRRAPKR ADVKSIWVGL RPLVKPPDDE
GDNTKGLSRE HTVLVSRSGL VTVTGGKWTT YRAMAEDVLA QCAAKSLIDA RAAGVTVDLK
LVGADETPGQ AHSISQPPGL HSYGNEQALV MSLPGAQSVL CDGLTEAMVR FAARYEYAIT
VEDVLARRSR LLFLDARLAS SLAAQVGGIL LQETGLDPQV DVFTELAQHY LCLPASCEQV
DQPRSLSANA TEAQVLADPR QTSQRA
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