| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3649 |
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| Symbol | |
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| ID | 3962762 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 4063828 |
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| End bp | 4065084 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637918467 |
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| Product | methionine gamma-lyase |
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| Protein accession | YP_524882 |
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| Protein GI | 89902411 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
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| TIGRFAM ID | [TIGR01328] methionine gamma-lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAAGA CAACAGCGGT CAAAGGCTTC AGCACCCGGG CCATTCACTT TGGCTACAAC
CCCGCCGACC ATCAGGGTGC GCTGGTGCCG CCGATCTACA CCTCGGCCAC TTTTGCCTTT
CCTGACGCGG CCTATGGCGC ACGTTGTTTC ACGGGTGAAG AAGCGGGTTA CTTTTACACC
CGCATTGCCA ACCCCACGCT GGCTTTGCTG GAAGGCCGCC TGGCCAGTCT GGAGCAAGGC
GCGGGGGCGG TGGTGTTTGG TTCGGGCATG GGTGCCATCA CGGCGACGCT GTGGTCGATG
CTGGAGCCGG GTGATGAAGT GCTGGCCGAC ATGACACTGT ACGGCTGCAC CTATGCCTTC
CTGACGCATG GCTTGAGCCG CTTCGGCGTG ACCGTGCGCC ATGTGGACAT GACCGACGCG
GCCAACGTGG CCCAGGCCAT GGGTGAGAAG ACCCGCGTGG TGTACTTCGA ATCCCCGGCC
AACCCCAATA TGCGCCTGGT GGACATTGAA GCGGTCTCCC GCGTGGCGCA TCAAGGCGGT
GCCCAAGTGG TGGTGGACAA CACCTATTGC ACGCCTTACC TGCAACAGCC CTTGCTGCTG
GGGGCTGATG TCAGCGTGCA CTCCATGACC AAGTACCTGG GCGGCCACGG CGACCTGACC
GCCGGCGCCG CGATTTTTGC CGATGCCCAA TTGGCCCAAC GGGTGCGGCT GTTCGGTCTG
AAAGACATGA CGGGTGCGGT GATGTCGGCG CAGGATGCCC ACCTGGTGAT GCGCGGACTC
AAGACCCTGA CCCTGCGCAT GGACCGGCAT TGCCAAAGCG CGCAAAAAGT GGCCGAGCTG
CTGCAGCGCC ACCCGGCGAC CAAGATGGTG CATTTCCCCG GCCTGCCCAC CTTTGCCCAG
CATGCCCTGG CGAAGCGCCA GATGCGCCAG TTTGGCGGCA TGATCGCGTT CGAGCTCCAA
GGCGGGCTGG CCGCGGGCAT CTGCTTCATG GACGCCTTGC AACTGGTCAC ACGCGCCGTC
AGCCTGGGTG ATGCGGAATC GCTGGCCCAG CACCCGGCCA GCATGACGCA CTCCACCTAC
ACGCCCGAGG AGCGCGCCGC GCATGGCATC AGCGACGGCC TGGTGCGCCT GTCCATCGGG
CTGGAGGACA TTGAAGATAT CCTGGCGGAC ATTGCGCAGG CGCTCGATCA GGCGCATGCT
CCGGGCCATT CCCGACCGGC AGTCGCCGCC GCAGAACGGT GCCGTGAGCT GGCCTGA
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| Protein sequence | MSKTTAVKGF STRAIHFGYN PADHQGALVP PIYTSATFAF PDAAYGARCF TGEEAGYFYT
RIANPTLALL EGRLASLEQG AGAVVFGSGM GAITATLWSM LEPGDEVLAD MTLYGCTYAF
LTHGLSRFGV TVRHVDMTDA ANVAQAMGEK TRVVYFESPA NPNMRLVDIE AVSRVAHQGG
AQVVVDNTYC TPYLQQPLLL GADVSVHSMT KYLGGHGDLT AGAAIFADAQ LAQRVRLFGL
KDMTGAVMSA QDAHLVMRGL KTLTLRMDRH CQSAQKVAEL LQRHPATKMV HFPGLPTFAQ
HALAKRQMRQ FGGMIAFELQ GGLAAGICFM DALQLVTRAV SLGDAESLAQ HPASMTHSTY
TPEERAAHGI SDGLVRLSIG LEDIEDILAD IAQALDQAHA PGHSRPAVAA AERCRELA
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