| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3644 |
|---|
| Symbol | |
|---|
| ID | 3962757 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | + |
|---|
| Start bp | 4059570 |
|---|
| End bp | 4060478 |
|---|
| Gene Length | 909 bp |
|---|
| Protein Length | 302 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637918462 |
|---|
| Product | cation diffusion facilitator family transporter |
|---|
| Protein accession | YP_524877 |
|---|
| Protein GI | 89902406 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1230] Co/Zn/Cd efflux system component |
|---|
| TIGRFAM ID | [TIGR01297] cation diffusion facilitator family transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAGTAGCG GACACGACCA CGACCATAGC CACGCGCCGG CCAACTTCAA CCGCGCGTTT
GCCATCGGCA TCGTGCTCAA TATCGTCTTT GTAGCCATTG AGGGCTTTTA TGGCTGGCGC
GTCAACTCGC TGGCCTTGCT GGCTGACGCC GGGCACAACC TGAGCGACGT GGCAGGCTTG
GTGCTGGCCT GGGGCGGCGC GCTGGCGGGC CGGCTGCGCC CGGATGCGCG CCACACCTAC
GGCTGGCAGC GGGCCTCGAT TCTGGCCGCG TTTGCCAACG CCTTGCTGCT GCTGGTGGCG
ATGGGCGCGC TGGCGTGGGA GGCCATGGGG CGGCTGCTCT CATCCGAGGT TTCCCTGCAG
GAACAAGGGG TCACCATCAT GGTGGTGGCC GGCATTGGCA TTGTCATCAA CACGGCCACC
GCGCTGCTGT TCATGCGCGG GCGTGAGAGT GACTTGAACA TTCGGGGTGC CTTCCTGCAC
ATGGCGGCCG ATGCCCTGGT GTCCGCTGGC GTGGTGGTGG CCGGTGCGCT GACACTCTGG
ATGGGCTGGA CCTGGCTGGA CCCGGTGGTG AGTCTGGTCA TTGCCGCCGT CATTTTCTGG
GGCACCTGGG ATTTGTTCAA GCAGTCCCTG CACATGCTGT TTGATGGTGT GCCGCGGCAC
ATCGACCTGC TGGCGGTGCG CGACTGCCTG GCGGCCCTGC CCGGCGTGGC CCGGGTGCAT
GACCTGCACG TCTGGGCCAT GGGCACGTCG CAAGTGGCGC TGACGGCGCA ACTGGTCATG
CCGCAAGGCC AGGCGGATGA CGCATTTCTG GCCGACGCCA CCCGGCAGAT GCACGACCGA
TTCGAGATCA CGCATGTGAC TTTGCAGGTC ATGAAAGTAC CGTTTACGCC ACCCTGCTCG
GACTTCTAA
|
|---|
| Protein sequence | MSSGHDHDHS HAPANFNRAF AIGIVLNIVF VAIEGFYGWR VNSLALLADA GHNLSDVAGL
VLAWGGALAG RLRPDARHTY GWQRASILAA FANALLLLVA MGALAWEAMG RLLSSEVSLQ
EQGVTIMVVA GIGIVINTAT ALLFMRGRES DLNIRGAFLH MAADALVSAG VVVAGALTLW
MGWTWLDPVV SLVIAAVIFW GTWDLFKQSL HMLFDGVPRH IDLLAVRDCL AALPGVARVH
DLHVWAMGTS QVALTAQLVM PQGQADDAFL ADATRQMHDR FEITHVTLQV MKVPFTPPCS
DF
|
|---|
| |