| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3623 |
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| Symbol | |
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| ID | 3962716 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 4039538 |
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| End bp | 4040734 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637918442 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_524857 |
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| Protein GI | 89902386 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0728465 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACCCA ATCCCCTGTT GCTGCGCCGC CTCGCCCTGG GCGCGCTTGC CTTGGCTCTG
GTTAGCGCGA TCGCCTTTGT GTCGCTGCGC ACCGGGCCGC TGGCCCCCAT CAAGATCACG
GTCACGCAAG TTCATGAGGG CACATTGGGC CCCGCCATTT TTGGCATCGG CACGGTCGAG
GCGCGCCGCA GCTGGATGGT CGGCCCCACG GTGGCGGGCC GGGTATTGAA CGTCAAAGTG
GACGTGGGTG ATGTGGTCAA GGCCGGGCAA CTGCTGGCCG AAATGGACCC GATTGACCTG
GAACAGCGCC TGAGCGCGCT CGATGCCTCA CTGGCACGGG CCGGCAGCGC ACAGACGGCG
GCACAAGCGC AATTGAAAGA TGCCACCGCG CGGCGCGCAC TGGCAGCCGC CAACACCCAG
CGCAACCAGG ACCTGGCGCG GCAAAACTTC ATCAGCCCCG GCGCACTTGA CGCGCGGCTG
CAAGAACAGG CCTCGGCCGA TGCCGCCGTG CAGGCGGCGC AGGCCAATTT GGCGGGTAGC
GGCCAAGACA TGAGCCGCCT GAAAGCCGAG CGCGCCGGTC TGGCGCAGCA ACGCAGCAAT
GTGCGCCTGC TGGCCCCGGC TGACAGCGTG GTCACCACCC GCGATGCCGA GGCCGGCAGC
ACCGTGGTGG CGGGCCAACC GGTCTTGCGT CTGATCGATC CGAGCAGCCT GTGGGTGAAA
TTGCGGGTGG ACCAGGGCCG CTCGGCCGGC TTGGCGCCCG GCTTGCAGGG CGGCATTGTG
CTGCGCTCAC AACCGCAAAC CACCTTGCCC GGCCAGGTCG CGCGCATTGA GTTGCTGGCT
GACAGCGTGA CTGAAGAGCG TATCGCGCAA GTGGCTTTTG CCGAACCGCC CCCAGGTATC
TCGGTGGGTG AAATGGCAGA AGTCACCCTG CAACTGCCCG CCACCGCCCC CGCCCTGCTG
CTGCCCAACG CCAGCGTACA ACGTCAAAAC GGACAAACCG GTGTCTGGCG GCTCAATGGC
GACAGGCCGG AATTTGCCCC GGTAGAACTC GGTGCCCGCA GCCTGGACGG TCAGGTGCAG
GTGCTCAAAG GACTGGGCCA AGGTGAGCGC GTGGTGGTCT ACAGCGAAAA AGCCCTCAAG
GCCGGTGCCC GCGTGAAGGT GGTGGAGACC TTGGCCCAAC CAACAGGCAA GCCATGA
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| Protein sequence | MTPNPLLLRR LALGALALAL VSAIAFVSLR TGPLAPIKIT VTQVHEGTLG PAIFGIGTVE
ARRSWMVGPT VAGRVLNVKV DVGDVVKAGQ LLAEMDPIDL EQRLSALDAS LARAGSAQTA
AQAQLKDATA RRALAAANTQ RNQDLARQNF ISPGALDARL QEQASADAAV QAAQANLAGS
GQDMSRLKAE RAGLAQQRSN VRLLAPADSV VTTRDAEAGS TVVAGQPVLR LIDPSSLWVK
LRVDQGRSAG LAPGLQGGIV LRSQPQTTLP GQVARIELLA DSVTEERIAQ VAFAEPPPGI
SVGEMAEVTL QLPATAPALL LPNASVQRQN GQTGVWRLNG DRPEFAPVEL GARSLDGQVQ
VLKGLGQGER VVVYSEKALK AGARVKVVET LAQPTGKP
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