Gene Rfer_3568 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_3568 
Symbol 
ID3961413 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp3967524 
End bp3968132 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content66% 
IMG OID637918383 
Productmethyltransferase type 12 
Protein accessionYP_524803 
Protein GI89902332 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2230] Cyclopropane fatty acid synthase and related methyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00317327 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGTAAGCA CCTTGCACGA TGAACGCCTG GATACGGTGG TGCGCGAACT GCTGGCTAGC 
GGCGCGACCA GCGTCCTTGA CTTGGGCTGC GGACCGGGTG AGCTGCTGCT GCGCCTGCGT
GGGCACGCGC AGTTTGTGCG CTTGCTGGGC ATCGACATCG ACGAGCGCGT ACTGGCCGAT
GCGCGTTTTG CGCTGGGCCT GGACTGGCTG CGACCCGACC CACGGCTGGC GGTACGCCTG
GGCTCGTTTA CGCAGGTCGA TCGGGATTTA CCGGGCTTCG ATGCCGCCGT GATGCTGGAA
ACCATTGAGC ACATCGACCC TGGCCACTTG CCCCGGGTGG AGCGCGCCGT CTTCGCCACC
ATGCACCCGG GCCTGGTGTT GGTGACCACC CCCAACCAGG AATACAACCT GTTGCATGGC
ATGGCAGCCG GGCGCAAACG CCACCCGGGA CACCGCTTTG AATGGACCCG GGCCCAGTTT
CAGCATTGGG CGGGTGGCGT GGCCCAGCGC CACAGCTACA CGGTCAGTTT TGCCAACCTC
GGACCGCCCG ACCCGCTGCG GGGGAGTTCG ACCCAGATGG CGCGCTTCAT GGTCAAGGAC
GCGCCATGA
 
Protein sequence
MVSTLHDERL DTVVRELLAS GATSVLDLGC GPGELLLRLR GHAQFVRLLG IDIDERVLAD 
ARFALGLDWL RPDPRLAVRL GSFTQVDRDL PGFDAAVMLE TIEHIDPGHL PRVERAVFAT
MHPGLVLVTT PNQEYNLLHG MAAGRKRHPG HRFEWTRAQF QHWAGGVAQR HSYTVSFANL
GPPDPLRGSS TQMARFMVKD AP