Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_3568 |
Symbol | |
ID | 3961413 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 3967524 |
End bp | 3968132 |
Gene Length | 609 bp |
Protein Length | 202 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637918383 |
Product | methyltransferase type 12 |
Protein accession | YP_524803 |
Protein GI | 89902332 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2230] Cyclopropane fatty acid synthase and related methyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00317327 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGTAAGCA CCTTGCACGA TGAACGCCTG GATACGGTGG TGCGCGAACT GCTGGCTAGC GGCGCGACCA GCGTCCTTGA CTTGGGCTGC GGACCGGGTG AGCTGCTGCT GCGCCTGCGT GGGCACGCGC AGTTTGTGCG CTTGCTGGGC ATCGACATCG ACGAGCGCGT ACTGGCCGAT GCGCGTTTTG CGCTGGGCCT GGACTGGCTG CGACCCGACC CACGGCTGGC GGTACGCCTG GGCTCGTTTA CGCAGGTCGA TCGGGATTTA CCGGGCTTCG ATGCCGCCGT GATGCTGGAA ACCATTGAGC ACATCGACCC TGGCCACTTG CCCCGGGTGG AGCGCGCCGT CTTCGCCACC ATGCACCCGG GCCTGGTGTT GGTGACCACC CCCAACCAGG AATACAACCT GTTGCATGGC ATGGCAGCCG GGCGCAAACG CCACCCGGGA CACCGCTTTG AATGGACCCG GGCCCAGTTT CAGCATTGGG CGGGTGGCGT GGCCCAGCGC CACAGCTACA CGGTCAGTTT TGCCAACCTC GGACCGCCCG ACCCGCTGCG GGGGAGTTCG ACCCAGATGG CGCGCTTCAT GGTCAAGGAC GCGCCATGA
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Protein sequence | MVSTLHDERL DTVVRELLAS GATSVLDLGC GPGELLLRLR GHAQFVRLLG IDIDERVLAD ARFALGLDWL RPDPRLAVRL GSFTQVDRDL PGFDAAVMLE TIEHIDPGHL PRVERAVFAT MHPGLVLVTT PNQEYNLLHG MAAGRKRHPG HRFEWTRAQF QHWAGGVAQR HSYTVSFANL GPPDPLRGSS TQMARFMVKD AP
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