| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3566 |
|---|
| Symbol | |
|---|
| ID | 3961411 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | - |
|---|
| Start bp | 3964708 |
|---|
| End bp | 3965937 |
|---|
| Gene Length | 1230 bp |
|---|
| Protein Length | 409 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637918381 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_524801 |
|---|
| Protein GI | 89902330 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3395] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.00898441 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGCGC TCGCCGACTC TTTGTTCATC CTTGCAGATG ACCTGTCGGG AGCGGCCGAT
TGCGCGATGG GTGCGGCCAA GTCCGGGTTG AAAAGTATCG TTCTTTTCAA CCCTGCAATT
GCCGAGCAAG CCCAAGTCAT CGCGATCGAT GCCGATTGCC GCTACCGGCC TGCTGCGGAG
GCAGGTGCGA TCAACGTCGC GCTGTGGCAA GCTCAAGCCA CTTCCGAGCG CCTGTTCTAC
AAAAAAATTG ATTCGACGCT GCGCGGCAAT TTTGCAGCGG AAATGGCAGC ACTCACGCGA
GCCGGCGTGG CCATCGTTGC GCCAGCCTTC CCTGCCACCG GGCGCACAAC GCAAAACGGC
CGCGTGTTTG TAAAGGGCGT GCCGCTCGAA CAGACCGAGA TTTGGGCAAA TGAGAGCATC
CCTGGGCAAG CCGATATCGT GGCCATGTTA CGCAGTGCAG GCATCTCTGC GACGAACATC
ACCTTGCCCG GCGTGCGCAA CAAGTTACGC GACGAGATTT CCCGCTTGGT GGCCGGCAAA
ACAGTCCAGG CGATAGTCTG CGACGCCGAG GAGGAGGCCG ATCTAGCCGC CATTGCTGCC
GCGTCGGTCG GACTGCCCGT CTATTGGGTC GGTTCGGCCG GATTGGCGAC TCACTTGCCA
CAAGCCGCCG GACTTGTCGG ACAGGCGGCC TCGCCCCGGC TCGCGGTATC CGGCCCGATT
GTCACAGTGG TTGGCAGCCT TTCCGCTGTA TCGCGCCAGC AGGCGCAGGT ACTCGAGTCC
CATGCCGACT TCGCCGTATT CGTGCCCACG CCCGCCTTGC TTCGCACCGG CGAAACCCAT
CCGCTTTGGC AATCACTGCG CGACCAAATA GGCGAAGCCT TGAGTGCAGG CAGGGATGTC
ATGATCCGGA CCGGCCTGGA GGAACATAAC GACCTTACCT ACGGACATGC CCTGTGTGAA
TCCCTCGGAA GCCTGGTATT GCCACTGGCA CCCGCTATCG GTGCCCTCAT CGCGACCGGT
GGCGAGACGG CACGCGCGCT GCTGCCGACA TTTGGCACCC ATGCCCTGCA ACTCATCAAG
GAAGTCGAGC CGGGCGTTCC CCTCTCACTG GCCTTGGGCA AACAGCAGAT TCCCGTCATT
ACCAAGGCAG GCGCGTTTGG CTCGCCGGCC GCACTCCTCA AAAGCTACAG CGAGCTCGCC
CGCATCCGCA GCGGCAACGT GGTCGCTTAA
|
|---|
| Protein sequence | MSALADSLFI LADDLSGAAD CAMGAAKSGL KSIVLFNPAI AEQAQVIAID ADCRYRPAAE
AGAINVALWQ AQATSERLFY KKIDSTLRGN FAAEMAALTR AGVAIVAPAF PATGRTTQNG
RVFVKGVPLE QTEIWANESI PGQADIVAML RSAGISATNI TLPGVRNKLR DEISRLVAGK
TVQAIVCDAE EEADLAAIAA ASVGLPVYWV GSAGLATHLP QAAGLVGQAA SPRLAVSGPI
VTVVGSLSAV SRQQAQVLES HADFAVFVPT PALLRTGETH PLWQSLRDQI GEALSAGRDV
MIRTGLEEHN DLTYGHALCE SLGSLVLPLA PAIGALIATG GETARALLPT FGTHALQLIK
EVEPGVPLSL ALGKQQIPVI TKAGAFGSPA ALLKSYSELA RIRSGNVVA
|
|---|
| |