Gene Rfer_3520 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_3520 
Symbol 
ID3963370 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand- 
Start bp3916266 
End bp3916976 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content60% 
IMG OID637918336 
ProductTetR family transcriptional regulator 
Protein accessionYP_524756 
Protein GI89902285 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCTCCA CCAAATCACC TGTTCAATAT GCACCTTCCA GCCGCCGCCC GGGCGCCGGG 
CATGCCTTGC ACAAGGGGCA GCAGACCAAG CAGGCCATTA TTGACGCCGC TTTGGGGCTG 
GCCGCAGAGA TCGGACTGGA AGGCCTGAGC ATCGGGGCCT TGGCCGAGGT GACCCGGATG 
AGCAAATCGG GGGTTTTTGC GCATTTTGGA TCGCGCGAAG AGCTGCAGAT TTCCGTCATC 
CACGAGTATT ACGCCCGCTT TTATGACGAG GTTTTTGCCC CGGCCATGGA TGAAGCCCGG 
GGCCTGCCGC GGGTGCGGGC CCTGTTTGCC AACTGGATGA AACGCGTGGC GATCGAACTT 
CAGTCCGGCT GTATTTTCAT CAGCGGTGCG GTTGAGTTTG ATGACCGTCC CGGGCCGGTG 
CGTGATGCAC TGGCGAGTTC GGTCAAGACC TGGCTGGCCG CCATGTACCG CGCCGTCGTC 
CAGGCCAAGC AGGAGGGGCA GCTCCATGAG GATGCTGACG AAGAGCAAAT GGCCTTCGAA 
ATCCATGGCC TGATCCTGGC CTTGCACTAT GAAGCCCGGT TTTTGCAGAA TCCAGCCGCC 
ATCGGGCGCG CCCACACCGG CTTTGACAAT ATTCTCAAGC GCTACGGCAA GTCTGCCGCT 
GGCGCATCAC ACCGTTCCCC AGCATCCAAT CGAAATTTAA AGGAGAAGTA A
 
Protein sequence
MTSTKSPVQY APSSRRPGAG HALHKGQQTK QAIIDAALGL AAEIGLEGLS IGALAEVTRM 
SKSGVFAHFG SREELQISVI HEYYARFYDE VFAPAMDEAR GLPRVRALFA NWMKRVAIEL 
QSGCIFISGA VEFDDRPGPV RDALASSVKT WLAAMYRAVV QAKQEGQLHE DADEEQMAFE 
IHGLILALHY EARFLQNPAA IGRAHTGFDN ILKRYGKSAA GASHRSPASN RNLKEK