| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3465 |
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| Symbol | |
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| ID | 3962645 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 3856983 |
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| End bp | 3857981 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637918283 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_524703 |
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| Protein GI | 89902232 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.570257 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAACCA AATGGCTAGA AGACTTTGTC TCCCTGGCTG AGACCCGCAG TTTCAGCCGT
TCCGCGCAAT TGCGCCACGT CACGCAGCCG GCGTTTTCGC GGCGCATTCA GTCGCTTGAA
ACATGGGCTG GCACCGATCT GGTCGATCGA AGCAATTATC CGACCCGTCT CACCCCGGGG
GGCGAAACGC TCTATGCCCA GTCATTGGAG GTATTGCAGG CTCTGCAAAG CACGCGCGCC
ATGCTGCGCG GGCATGCCTC TGCCGGGCAG GATGTGATTG AATTTGCCGT GCCGCACACA
CTGGCTTTCA CGTTTTTTCC GGCCTGGGTG TCGGCCTTGC GGCAACAATT CGGCCCCATC
AAGAGCCGCC TGATTGCGCT CAATGTGCAC GACGCCGTCA TGCGCCTGGT GGAGGGGAGT
TGCGATCTGT TGATTGCCTA TCATCATCCG TCCCAGCCCT TTCAGCTCGA TGCTGATCGC
TACGAGATGG TCAGTTTGGG CGAAGAGGTG GTGGCGCCTT ATGCCAAACC GGATGCAGAC
GGTGCGCCGA TGTTTCTGTT GCCAGGGCGA CCGGGCCAAC CCTTGCCGTA CCTGGGCTAC
GCGCCTGGCG CCTATTTGGG GCAGATGGTG GACCTGATCC TCAAGCAGTC GGGCACTGCC
ATTCACTTTG ACCGCGTTTA TGAGACCGAC ATGGCGGAAG GCCTGAAGGC GATGGCGCTG
GAAGGCCATG GCATTGCCTT TTTGCCTTTC AGTGCCGTCA AGAAAGATTT GTGCGCCAGA
AAATTGGTAA GTGCGGTGCC GCTGGACCTG AAAGGTCTGC AGATCACCAT GGAGGTACGG
CTCTACCGGG AGCGGCCCTC GGTCAAGGAA AACGGCAAGC TCGGGGGGCA CAGATCGGCC
CCATCAGTTG AGCGCGCGAC CAAGAGTGCG GCGCAGGCCT TGTGGGACTA TTTGCTGGCG
CAGGGCCGAA AGGATCCGAC CGATGTTGTG TTGCTGTAG
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| Protein sequence | METKWLEDFV SLAETRSFSR SAQLRHVTQP AFSRRIQSLE TWAGTDLVDR SNYPTRLTPG
GETLYAQSLE VLQALQSTRA MLRGHASAGQ DVIEFAVPHT LAFTFFPAWV SALRQQFGPI
KSRLIALNVH DAVMRLVEGS CDLLIAYHHP SQPFQLDADR YEMVSLGEEV VAPYAKPDAD
GAPMFLLPGR PGQPLPYLGY APGAYLGQMV DLILKQSGTA IHFDRVYETD MAEGLKAMAL
EGHGIAFLPF SAVKKDLCAR KLVSAVPLDL KGLQITMEVR LYRERPSVKE NGKLGGHRSA
PSVERATKSA AQALWDYLLA QGRKDPTDVV LL
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