| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3452 |
|---|
| Symbol | |
|---|
| ID | 3962559 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | - |
|---|
| Start bp | 3840374 |
|---|
| End bp | 3841558 |
|---|
| Gene Length | 1185 bp |
|---|
| Protein Length | 394 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637918270 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_524690 |
|---|
| Protein GI | 89902219 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0628] Predicted permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACAGATT CAACTTCAGT GCAACACGAC GGTATGGGTG CGCAGGCAGA GACAGCGGCC
ACCGAGCCGG CAGAACCATC GCGCGTGCTA CTGCATATGC CAGTGGACGT GCGCAGCGTT
TCGCTGGTGG TGATAGCTAC GCTGGCCAGC GTTTTTGCGT TGCGTTGGGC CGGTGCCGTC
TTTATTCCGG TGTTGGTCGG CTTGCTTTTC AGTTATGCAC TGTCGCCGGT GGTGGATTGG
CTGCAGTTGC TCCGGATCCC ACGCGCATTG AGCGCAGCGG TATTGATATT GGGCATTCTC
AGCGGCATCG GAGCAGGTGC TTATTCTTTG AGCGATGACG CCAGCAAGCT GGTCGAATTG
CTCCCCGCGG CCGCGCAAAA GCTGCACGAT TCGGTTCGAT CCCTGCCAGG CAAGCCGAAC
AATACACTGA CAACAGTGCA GAGGGCGGCC GCTCAAATTG AGCAAGCGGC CGATGAGTCG
ACCCAGGCCG CACCGGTTAG CCGGAGCGTC CAACGGGTGC AGATTGAAAA GCCCAAGTTC
AATATCAAGG ACCATCTGTG GAGCGGCACC ATGGGACTGC TGGGGATGTT GGGCCAGATC
GGGATGGTGG CGCTGATCAC TTTCTTTCTC ATGGCCTCGG GCGACCAGTT CCGGCGCAAG
TTGATCAAAC TTACCGGACC CACGCTGAGC AAGAAGAAAG TCACGTTGCA GGCACTCAAT
CAGATTCACG ACCAGATCCA ACGCTACATG CTGGTGCAGC TGTTTACAAG TATCCTGGTC
GGTTTGGCCA CCTGGTTGAG CTTCTTGGCC ATCGGTCTGG AGCACGCGGC GGTATGGGGT
GTTGCCGCAG GTGTGCTCGA TCTGATTCCC TATGTCGGCA GTGTGGCCAT CGCGACCGGT
TCGGCGCTGG TGAGCTTCCT GCAGTTTGGC ACGCTGGAGA TGGCGCTGAT AGTAAGCGGA
ACTTCCCTGG TGATTCATTC GATCGAAGCT TTCCTGCTGA CACCTTGGTT GACGAGTCGC
ACCAACAAGA TGAATCCGGT TGCCATCTTC GTCGGCGTAC TGGCCTGGGG CTGGCTCTGG
GGCATATGGG GACTTTTGCT AGGGGTTCCG ATCCTAGTGG TCATCAAGGC TATTTGCGAC
CGGATTGAAG ACCTTAAGCC GGTTGGTGAA TTCCTCGGTG CTTGA
|
|---|
| Protein sequence | MTDSTSVQHD GMGAQAETAA TEPAEPSRVL LHMPVDVRSV SLVVIATLAS VFALRWAGAV
FIPVLVGLLF SYALSPVVDW LQLLRIPRAL SAAVLILGIL SGIGAGAYSL SDDASKLVEL
LPAAAQKLHD SVRSLPGKPN NTLTTVQRAA AQIEQAADES TQAAPVSRSV QRVQIEKPKF
NIKDHLWSGT MGLLGMLGQI GMVALITFFL MASGDQFRRK LIKLTGPTLS KKKVTLQALN
QIHDQIQRYM LVQLFTSILV GLATWLSFLA IGLEHAAVWG VAAGVLDLIP YVGSVAIATG
SALVSFLQFG TLEMALIVSG TSLVIHSIEA FLLTPWLTSR TNKMNPVAIF VGVLAWGWLW
GIWGLLLGVP ILVVIKAICD RIEDLKPVGE FLGA
|
|---|
| |