Gene Rfer_3401 details

Gene Information

• Locus tag: Rfer_3401
• ID: 3962185
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodoferax ferrireducens T118
• Kingdom: Bacteria
• Replicon accession: NC_007908
• Strand: +
• Start bp: 3786595
• End bp: 3787263
• Gene Length: 669 bp
• Protein Length: 222 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 637918221
• Product: lysine exporter protein LysE/YggA
• Protein accession: YP_524641
• Protein GI: 89902170
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG1280] Putative threonine efflux protein

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.211755
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTGACCC TGTTTTTCTC CGCCTTTGTA CTGGGCCTGG TGTTTAATGC CGCGCCCGGT 
GCCGTGTTTG CCGAAACCGT GCGCCAAGGT GTACGCGGGG GCTTTCGTCC GGCTCTGCAG 
ATCCAGCTCG GCTCTCTGGT GGGTGATGCC ACCTGGGCCA TGTTGGGCCT GGCCGGCATT 
GGTCTGGTCA TGCAAATCGA CATGCTGCGC CTGCCACTGG GTTTTGCTGG CGCGGTGTAC 
CTGCTCTACC TCTCGTGGGA CAGCTGGCGC GCAGCGGCCG TGGAGTACAG CATAAACCCC 
GGTCACGCCC CAGCGGAGTC GCCGGCCCTG CGCAAGGGCA TGGCCCTGTC GCTCGCCAAC 
CCGCACAACC TGGCCTACTG GGCAGCCATT GGTGGTGCCA TGGGCGCAGT GGGTGTCAGT 
GATCCCAGCA CGACGGATTA CGGTGTGTTT TTTGCGGGTT TCATGCTGTC CTCGCTGCTG 
TGGTGCTTTG TCTGTGCCGC TGCAGTGGAC CGCGTGTTTC GCCGCGCTGG TGCGCAGTGG 
GCCCGCTTCA CTTACCGTCT CTGTGCTGTG GCCATGCTGG CCCTGGCCCT GGGCTCGCTG 
CGTGACCTCT TGCACCCGGG GCATTCCACT TCTCCCTCGT CACCTGTCGG CATCCACCAC 
CCGCAGTAA 

 

Protein sequence

MLTLFFSAFV LGLVFNAAPG AVFAETVRQG VRGGFRPALQ IQLGSLVGDA TWAMLGLAGI 
GLVMQIDMLR LPLGFAGAVY LLYLSWDSWR AAAVEYSINP GHAPAESPAL RKGMALSLAN 
PHNLAYWAAI GGAMGAVGVS DPSTTDYGVF FAGFMLSSLL WCFVCAAAVD RVFRRAGAQW 
ARFTYRLCAV AMLALALGSL RDLLHPGHST SPSSPVGIHH PQ