| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3379 |
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| Symbol | |
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| ID | 3960951 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 3754419 |
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| End bp | 3755522 |
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| Gene Length | 1104 bp |
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| Protein Length | 367 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637918199 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_524619 |
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| Protein GI | 89902148 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR03408] urea ABC transporter, permease protein UrtC |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGACGA CATCTATCCA ACTTCCCGCG CCCTTGCTAA CCCGCACTGG CTGGTCCGCC
TTCATCGTCG CCTTGATCGT GGTCTGCGCC GTGGCGCCCG CGCTCAATCT GCTGGTGCCC
AAAGACAGCC TGTTTCACCT GAGCGACTAT GCCGTGGCCC TGGTGGGCAA GATCATGTGC
TACGCCATCT GCGCGCTGGC CATGGACCTG ATCTGGGGCT ACACCGGAAT CCTGAGCCTG
GGCCACGGCG TGTTCTTCGC GCTGGGGGGC TACGCCATGG GCATGTACCT GATGCGCCAG
ATTGGTCTTG AGGGCAACTA CAAAAGTAAT CTGCCCGACT TCATGGTGTT CCTGGACTGG
AAGACGCTGC CCTGGCACTG GACTTTCAGC GACAGCTTTA TCGCCACGCT GTTCCTGGTG
CTGGCGGTGC CGGGGCTGGT GGCGTTTGTG TTCGGCTACT TTGCCTTTCG CTCGCGCATC
AAGGGTGTGT ACTTTTCCAT CATCACCCAG GCCATGACCT TTGCCGCCAT GCTGCTGTTC
TTTCGCAACG AGACCGGCTT TGGTGGCAAC AATGGCTTCA CCGACTTCAA GCGGATTCTG
GGCATTCCGA TTGCCACGCC GGGCATGCGC ATGCTGCTCT TTGTGCTGAC GGGCGTGATC
TTGCTGGGTT TCTTTCTGCT GGCGCGCTGG CTGGTGGCCG CCAAGTTTGG CCGCGTGCTG
CAGGCGGTGC GCGATGCCGA GACGCGCGTC ATGTTCTCGG GCTACTCGCC CCTGGGCTAC
AAGCTCACCA TCTGGACCAT CTCGGCCATG ATGTGCGGCG TGGCCGGCGC CCTGTATGTG
CCGCAAGTGG GCATCATCAA CCCGAGCGAG ATGAGCCCGG CCAATTCGAT CGAGATTGCG
ATCTGGGCCG CAGTCGGTGG CCGCGCTTCG CTGATTGGCC CGATCGTCGG CGCCTTTATC
GTCAACGGTG CCAAGAGCTG GCTGACGGTG GCCTACCCCG AGTTCTGGCT GTACTTTTTG
GGCGCCTTGT TTATTGGTGT GACGCTGTTC TTGCCGGATG GCGTGGTGGG CCTGATCAGA
AAGCTGAAGG GGAACAAAGC ATGA
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| Protein sequence | MTTTSIQLPA PLLTRTGWSA FIVALIVVCA VAPALNLLVP KDSLFHLSDY AVALVGKIMC
YAICALAMDL IWGYTGILSL GHGVFFALGG YAMGMYLMRQ IGLEGNYKSN LPDFMVFLDW
KTLPWHWTFS DSFIATLFLV LAVPGLVAFV FGYFAFRSRI KGVYFSIITQ AMTFAAMLLF
FRNETGFGGN NGFTDFKRIL GIPIATPGMR MLLFVLTGVI LLGFFLLARW LVAAKFGRVL
QAVRDAETRV MFSGYSPLGY KLTIWTISAM MCGVAGALYV PQVGIINPSE MSPANSIEIA
IWAAVGGRAS LIGPIVGAFI VNGAKSWLTV AYPEFWLYFL GALFIGVTLF LPDGVVGLIR
KLKGNKA
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