| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3339 |
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| Symbol | |
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| ID | 3963038 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 3707044 |
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| End bp | 3707895 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637918159 |
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| Product | methylation |
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| Protein accession | YP_524579 |
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| Protein GI | 89902108 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2165] Type II secretory pathway, pseudopilin PulG |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.510017 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACCTC CTTCTTGTCA GCGCGGCTTT ACCCTGGTCG AACTGATCAT GGTGATCGTC
ATCATGGGCG TGATCGGCGG TATCGTGTCG GTCTTCATGA AAAGCCCGAT TGACGCCTAC
TTTGCCAGTG CCCGGCGCGC GGCGCTAACC GATACGGCCG ATACCACGGT GCGGCGCATG
ACGCGCGATA TTCAAAGGGC GCTGCCCAAC AGCATTCGCA CGCCGACTAC CACGCCAGCC
AATCAGTGCG TCGAATTCGT ACCGACCAAG ACCGGTGCCC GCTACCGGGC CGAAAACATG
GCGGCGGGTG ACAACACCAG TTTGGATTTC ACTGCCGCTG ACACGACCTT CCATATGTTG
GGCAGCAATG TTGCTTTGCC AGCAGATCAG CGAATTCTGG CGGGTGATGT GATTGTGGTT
TACAACCTGG GCATTCCCGA TTCGGATGCC TACCAGCTCA CGGGCAAGAT CAATCGTGCC
GTAGTTGGTG GATCAAACCC CCTGAGCGAG GCTGGCGCTC CCCCTGAGAC GACCATTCCC
ATTGCCAGCA CGCAGTTTCC GTTGGCCTCA GGCAGCAACC GCTTTCACGT GGTGTCCGGC
GCCGAAAATG TCGTGTCATT TGTATGCAGC GGTGGGGACT TGCATCGCAC GATCAGCACT
TTTGCGGCCG CTGCCGCTAC CAGTTGTCCC GCTACTGGCC CCATCCTGGC CCGCAATGTC
AGCTCATGCA ACTTCGACTA CAGCGGCTCC GACCTGCAAC GCAACGCTCT CATTCGCATG
ACCCTGCAAC TGACCGACAG CGGCGAAACC GTCAGCCTGC AGCACGAAGT GCATGTGAGC
AACACGCCAT GA
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| Protein sequence | MKPPSCQRGF TLVELIMVIV IMGVIGGIVS VFMKSPIDAY FASARRAALT DTADTTVRRM
TRDIQRALPN SIRTPTTTPA NQCVEFVPTK TGARYRAENM AAGDNTSLDF TAADTTFHML
GSNVALPADQ RILAGDVIVV YNLGIPDSDA YQLTGKINRA VVGGSNPLSE AGAPPETTIP
IASTQFPLAS GSNRFHVVSG AENVVSFVCS GGDLHRTIST FAAAAATSCP ATGPILARNV
SSCNFDYSGS DLQRNALIRM TLQLTDSGET VSLQHEVHVS NTP
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