| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3279 |
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| Symbol | |
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| ID | 3962426 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 3640227 |
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| End bp | 3641669 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637918099 |
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| Product | NADH/ubiquinone/plastoquinone (complex I) |
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| Protein accession | YP_524519 |
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| Protein GI | 89902048 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0651] Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.621261 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGCGC TCGCTTCCTC CTCCTCCGCC GTCCTGACGG CGTCGCCAGA CCAGGTGGCA
CCCAACACCA GGTGGGTCGC TCCCGCCCTG GTGGCGGTCG CGCTGATCAA CTGGCTGGCC
TCGGTGGCCT TGTTCATCAC GCATCCGCTG GCGGAACTGC CGCTGTACTT TGCCAGGCGC
TATCTGGTGC TCGACGCCAC CTCGCTGCTT TTTGTCGTGC TGGTCAACAC GGTGTTTCTG
GGGATCAGCG TTTATATCTT GTCGCGCGAA CACACATCAA ACGTCCTGTC CCATGACATC
CGCTCGCGTG CGGGTCTGAT GCTGGCCTTC ATGCTCATCA TCAACCTGGG CGTCATGTCC
AACCACCTCA TTCTGATGTG GGCGCTGATC GAGCTCAGCA CCTTGTGCGC GGCACCCCTG
GTGGCGCGTG GTGATGCAGC CTCACCCAAA GGGGTGGCCT GGCGCTACAT GCTGTACTCG
GCCATGACGC TGTCCATCAC CTTTCTGGGC TTCATGTGTC TGGCCCAATC AGCCGACTTG
CGCGGCGTCG ATATCAGCTT TTCGGTTGAT CAACTCGGAC GGGCACTGAC CACCAACAGT
GATGGCTGGC AACGGCTGGG TTTGTCCTTC ATGCTGTTTG GGCTGGGTGG CAAGCTCGGT
CTGGCGCCGC TCTACAGCTG GATGCCCGAA ACCTACGAAG CCGCGCCCAC CAGCACCAGC
GCGCTGCTGG CGGCGGTGCA GTTCAACATC AGTGTGGTGG CGGTGTTTCG CATCCTGCAG
GTGTTTCAGG GCTTCGAGTC CCATTTTGTG TCCCAGGAGT TGCTGCTCAT GGGCTATCTG
TCGCTGGTCG TGGCCGCGGT GCAGGTGATG GCGGTGCGCA ACTACAAGCG TCTGATCGCC
TATGCCTGCG TCAGCTCCTC CGGCGTCATC GCCCTGGGTC TGTCGGTGGG CAAGGCGGCG
GCCTATGGCG TCGTGCTCTA CATCGTCAGC AATGCGTTTG TGAAATCGCT GCTGTTTTTG
ACCGCGGGAC GCTTGCGCGC GGTCTATGGC ACCAACGATG TCGCCCCGCT GAGCGGCGTG
ATCCGGGTCA TGCCGTTTTC TGGCTTGCTG TTTACCGTGG GTATTTTTGC CTTGCTGGGC
TTTCCACCGT TTGCCAGTTT TCTGGCCGAG ATGATGATCC TCTCGGGCAT CGTGCAGGCC
GGCAACCTGA TGGCGTTCAC GCTGATGTGT GTGATGCTGA CCATCATTTT TGTGGCAACC
GGGCGCACCG TGTTCCCGAT GCTGTGGGGG GCCTCCAAAC GCGAAGGGCC ACCGGTGCAC
GAATCCTGGA TCGCGGCCCT GCCCAAGCTG GGGTTTGTCT TCATCCTGAT CATGCTCGGC
ACCTACGCCC CCAAACCCAT CACCCAATTG CTGATTGCGG TGGCGCAGTC GATTGGCGGT
TAA
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| Protein sequence | MSALASSSSA VLTASPDQVA PNTRWVAPAL VAVALINWLA SVALFITHPL AELPLYFARR
YLVLDATSLL FVVLVNTVFL GISVYILSRE HTSNVLSHDI RSRAGLMLAF MLIINLGVMS
NHLILMWALI ELSTLCAAPL VARGDAASPK GVAWRYMLYS AMTLSITFLG FMCLAQSADL
RGVDISFSVD QLGRALTTNS DGWQRLGLSF MLFGLGGKLG LAPLYSWMPE TYEAAPTSTS
ALLAAVQFNI SVVAVFRILQ VFQGFESHFV SQELLLMGYL SLVVAAVQVM AVRNYKRLIA
YACVSSSGVI ALGLSVGKAA AYGVVLYIVS NAFVKSLLFL TAGRLRAVYG TNDVAPLSGV
IRVMPFSGLL FTVGIFALLG FPPFASFLAE MMILSGIVQA GNLMAFTLMC VMLTIIFVAT
GRTVFPMLWG ASKREGPPVH ESWIAALPKL GFVFILIMLG TYAPKPITQL LIAVAQSIGG
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