| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3226 |
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| Symbol | |
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| ID | 3962866 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 3573326 |
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| End bp | 3574351 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637918045 |
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| Product | ornithine cyclodeaminase |
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| Protein accession | YP_524466 |
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| Protein GI | 89901995 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2423] Predicted ornithine cyclodeaminase, mu-crystallin homolog |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.674248 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGTTCA TCCCCAAAGA CGAAGTGGCT CGCCTGACGC CCTACGGCGC GCTGATCCAA
TCTCTCGCCA AGGGCTTGCG CGAGCCTATT GAGTCGCCGC CGCGCAGCCA TTTCAATCCC
AACCACGATG CCAGCACGGT TCTGATCATG CCCGCTTGGA GACCCAATCG CATGATGGGC
ACCAAGATCG TCTCCATCTG GCCTGAAAAC AATGCCAGGG GCAAGCCCGC CGTATCTGCC
GTTTATGTGC TGACCTCGTG TGAAGACGGC ACAACGCTGG CTGTCATCGA TGGCACCGAA
TTGACGCTGC GCCGCACCGC AGCGGCTGCC GCACTGGCGG CCCGGCTCCT GGCTCGACCC
GGCAGTACAA GACTCGCGGT GCTGGGCACT GGTGCACTTT CGGCGCACAT GGCGATGGCG
CATCACAGCG TGTTTAAGTT GTCTGAAACC GTCATATGGG GGCGCCAACT CGACAAGGCC
CAGGCCGTTG TCGATGAACT GGCCAAGGTG GGTATTGCGG CACGCGCGAC GACAAATCTG
GAAAGCACGC TGGCCGCCAT CGACATCGTG GCTGCGGTCA CGACGGCGAC CGCACCGTTC
ATTCGAAGCG AGTGGGTCAA ACCTGGCACA CACTTGGGTT TGATCGGCGC ATTCACCGCC
AACATGGCCG AAGCAGAACC TCAACTCCTG CCCGGCGTCA GGCTCTTTGT CGACACCCGT
GAAGGCGTAC TGCAAAAAGG CGGTGAGGTC TGGCAGGCCT TGCGTGCTGG CTTGATTTCC
GAGGCAGACG TGCGCGGGGA ACTGACTGAG CTGCTGGCTT CTTCACCCCA CATGACGGGA
CGCAGCTCAG AGCAAGATAT CACGGTCTAT AAGTCCGTGG GTTTTGCCGC ACTCGACTTG
ATCGCGGCAG AGCATGTGCT GCAGGGTTTC ACACCGCTGC CGGCCCCTGC GCTGATGGCT
TACCCCGCAA CAACGTCAGT GCCAACAGGG CAGAAGCCAC CATCAAAAAC AGACTCACCG
CGTTGA
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| Protein sequence | MQFIPKDEVA RLTPYGALIQ SLAKGLREPI ESPPRSHFNP NHDASTVLIM PAWRPNRMMG
TKIVSIWPEN NARGKPAVSA VYVLTSCEDG TTLAVIDGTE LTLRRTAAAA ALAARLLARP
GSTRLAVLGT GALSAHMAMA HHSVFKLSET VIWGRQLDKA QAVVDELAKV GIAARATTNL
ESTLAAIDIV AAVTTATAPF IRSEWVKPGT HLGLIGAFTA NMAEAEPQLL PGVRLFVDTR
EGVLQKGGEV WQALRAGLIS EADVRGELTE LLASSPHMTG RSSEQDITVY KSVGFAALDL
IAAEHVLQGF TPLPAPALMA YPATTSVPTG QKPPSKTDSP R
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