| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3105 |
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| Symbol | |
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| ID | 3962118 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 3444866 |
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| End bp | 3445789 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637917924 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_524345 |
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| Protein GI | 89901874 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACCCAAC AACCTCCTTC AAGCGCCGAC GTTCCGGCCC TGCCAACAGC ATCTACCGCT
GTGCAGGGCG CACCCGTGCG CACACCGTGG ACGGAATTCT GGCGCAAGTT CAGAAAGCAG
CATGTTGCCG TGGCGGCTCT GGCACTCGTG CTGGTTCTGG TGTTGCTGGC CGTGTTTGCG
CCAGCGATCG TCCCCTACGA TGCGGAAAAC TTTTTTGACT ACGAAAAGCT CAACGACGGC
CCCTCGTGGC AGCACTGGCT AGGTGTGGAT CCGATGGGCC GCGACATCTT GAGCCGCATC
CTGGTGGGCG CGCGCATATC GCTGGCCGCA GGATTTCTGT CGGTTGCAAT TGGTGGCGCC
ATTGGCACCG CGCTCGGTCT GCTCGCAGGT TACTATGAAG GCTGGTGGGA CCGCATTGTG
ATGCGCATTT CCGATGTGCT GTTTGCCTTC CCCGGAATTT TGCTGGCACT GGGCGTGGTC
GCCATTCTTG GCAGCAGCAT GGTCAATGTG GTGATCGCCG TGGCGGTGTT CAGCGTACCC
GCGTTTGCGC GCCTGGTACG TGGTAACACC CTGGTGCTCA AGCAAATGAC TTATATCGAG
GCGGTCCGCA GCATTGGTGC GTCAGACTGG ACCATCATCA TGCGGCACAT TCTGCCGGGC
ACCATTTCAT CCATCGTCGT GTACTTCACC ATGCGATTGG GCACCTCCAT CATTACAGCA
GCCAGCCTGT CATTTCTCGG CATGGGGGCT CAGCCGCCCA CACCTGAATG GGGTGCCATG
CTCAATGAAG CCCGCGCCGA CATGGTGAAC GCGCCGCACG TGGCGCTATT TCCCAGTTTG
GCGATCTTTA TGACGGTGCT GGCTTTTAAC CTGTTGGGCG ATGGCCTGCG CGATGCGCTG
GATCCGAAAA TTGATCGCGA GTAA
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| Protein sequence | MTQQPPSSAD VPALPTASTA VQGAPVRTPW TEFWRKFRKQ HVAVAALALV LVLVLLAVFA
PAIVPYDAEN FFDYEKLNDG PSWQHWLGVD PMGRDILSRI LVGARISLAA GFLSVAIGGA
IGTALGLLAG YYEGWWDRIV MRISDVLFAF PGILLALGVV AILGSSMVNV VIAVAVFSVP
AFARLVRGNT LVLKQMTYIE AVRSIGASDW TIIMRHILPG TISSIVVYFT MRLGTSIITA
ASLSFLGMGA QPPTPEWGAM LNEARADMVN APHVALFPSL AIFMTVLAFN LLGDGLRDAL
DPKIDRE
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