| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3077 |
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| Symbol | |
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| ID | 3962641 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 3405240 |
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| End bp | 3406793 |
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| Gene Length | 1554 bp |
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| Protein Length | 517 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637917897 |
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| Product | DNA-cytosine methyltransferase |
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| Protein accession | YP_524318 |
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| Protein GI | 89901847 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0270] Site-specific DNA methylase |
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| TIGRFAM ID | [TIGR00675] DNA-methyltransferase (dcm) |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.485404 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGCAGC GCGGTGAGAT TCCGGTGATC GACTTGTTCG CCGGTCCGGG GGGGCTTTGC
GAAGGTTTTT CGTCAATTTT TGACGAAACC GGCGCGCGCC GCTTCGCCGT CAAGGTGTCG
ATTGAAAAGG ACCCCGTGGC TCATCGAACC TTGCTGCTGC GGGCGATTTT TCGGAAGTTT
GCAAAGGGCA AGGTTCCAGA CTGCTATTAC GAGTATCTGC GCGGGAACAT TACCCGCGAG
CAGTTTTTCG CGCATCCGGA CATCAAAGAT GCGGCTGAAC ACGCCGCGAA GGAAGCCAAG
TGCGCGGAGC TTGGACTTAC CCCGCACGCG GAAATCGACT CTTGGATCAG CGAGGCGCTC
GGCGACAAAA CCGATTGGGT TCTAATTGGT GGCCCGCCAT GTCAAGCGTA TTCATTGGCC
GGACGTTCGC GGCTAAGCGG AATGAAGCGC GAAGAGTTCG AGAGCGACAA ACGGCACTTT
CTCTACACGG AATACCTGCG CATCATCCAG CAGTTTGAAC CGTCGGTTTT CGTCATGGAA
AATGTCAAGG GGATGCTCAA CTCAACCCAC GGTGGATCGC GCATATTCGA TCGCATCCTC
GCCGATCTCA AAGCGCCCAA AGAGGGCCTC AGCTATGAGA TTCGTTCGTT GGTCGTTGGC
GGGGACGAGC TCGAACCCAA AGACTATGTT ATTCAGGCCG AAAACTATGG CATTCCGCAA
AACCGCCACC GAGTGATTCT TTTCGGAATC AGGTCCGATG TGGCGGAGTC GACCACGGCG
TTGAAAACCA GTCCACGTCA ATTTTTGTTG AGGAAGTCCT TTCCGCAGGT TGGCGTTGAT
GAGGCTTTGG CTGGATTGCC TGCGATTCGA AGCCGCCTGT CAAAGGAAGA TGATTCGCAT
AAAAAGTGGC TTTCGGCCTT GCGCAAGGCG CCGACCACGC TTTTGACATG GCATATGCCA
GTGAGGGAAA AAATTGAAGT CCTGATGAAG AGCGCGGCGA AGAAGGCTAA AAACCACGAG
TCCGCTGGGG AAAAGTTCAC TGCCATGAAG GTGGAGCCAG GTGAAAAGAT GCCTCAACCG
TTAAGGGCAT GGTTGCTGGA TGAGCGTGTG GGGGGGGTAG TTCAGCATGA GAGCAGAAGC
CATATGCGAT CTGACTTGCA TCGCTACATG TTTGCGTCTT GTTTTTTAAA GTCTGAAAAA
TATGCGCCAA CTCTTCGCAA TTTTCCACCT AGGCTTTTGC CTGCCCACTT AAACGTCGAT
GCCGAAACGG TTCCCTTCGT GGATCGTTTT CGTGTGCAGG TGGGTAACGC CCCGTCCTCC
ACGGTGGTCG CACACATCAA GAAGGATGGG CATTACTACA TCCATCCGGA CTCATCGCAG
TGCAGGAGTC TGACGGTCCG CGAAGCCGCG CGATTGCAGA CTTTTCCCGA CAATTATTTC
TTCGAGGGGA ATCGCACGGA GCAATATGGC CAAATTGGCA ATGCGGTTCC GCCATTACTG
GCAAAGAAAA TTGCCAAGGT GATTTACAAG TTTTTGTCGT CGCCGCGCGA GTGA
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| Protein sequence | MLQRGEIPVI DLFAGPGGLC EGFSSIFDET GARRFAVKVS IEKDPVAHRT LLLRAIFRKF
AKGKVPDCYY EYLRGNITRE QFFAHPDIKD AAEHAAKEAK CAELGLTPHA EIDSWISEAL
GDKTDWVLIG GPPCQAYSLA GRSRLSGMKR EEFESDKRHF LYTEYLRIIQ QFEPSVFVME
NVKGMLNSTH GGSRIFDRIL ADLKAPKEGL SYEIRSLVVG GDELEPKDYV IQAENYGIPQ
NRHRVILFGI RSDVAESTTA LKTSPRQFLL RKSFPQVGVD EALAGLPAIR SRLSKEDDSH
KKWLSALRKA PTTLLTWHMP VREKIEVLMK SAAKKAKNHE SAGEKFTAMK VEPGEKMPQP
LRAWLLDERV GGVVQHESRS HMRSDLHRYM FASCFLKSEK YAPTLRNFPP RLLPAHLNVD
AETVPFVDRF RVQVGNAPSS TVVAHIKKDG HYYIHPDSSQ CRSLTVREAA RLQTFPDNYF
FEGNRTEQYG QIGNAVPPLL AKKIAKVIYK FLSSPRE
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