Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_3071 |
Symbol | |
ID | 3962635 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 3396620 |
End bp | 3398128 |
Gene Length | 1509 bp |
Protein Length | 502 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637917891 |
Product | hypothetical protein |
Protein accession | YP_524312 |
Protein GI | 89901841 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0323] DNA mismatch repair enzyme (predicted ATPase) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACACAAA AGACACGCAA CGCGCCTCCG CGAGCCAATG CCATGCTCGA AGCCTTGCGG GGCTTAGGCT ACTCGACTGC CGCCGCGCTG GCCGACATCA TCGACAACAG CATCTCAGCG GGAGCAAGCG AGGCTCGACT CGATTTCGCA TGGAACGGTG CCACAAGCCG CATTTCAGTC CTGGACGACG GGCGTGGAAT GACCGATGCC GAGCTCGAAA GCGCCATGAC CTTGGGCGAC AAGAACCCAC TCGATGCGCG CGCCTCCCAC GACCTTGGCC GGTTTGGCAT GGGAATGAAG ACCGCATCCT TTTCTCAGTG CCGCCGCTTG ACTGTGGCTA CTGTGAAAGA CGGCGACACT AGCTGCCTGC GGTGGGACTT GACGGAACTG GCGGCGCATC CCGACAGCGG ATGGCTCATG CATGAAGGCG CGGCCAATGG GTCTGAGCAG TTCCTCGCCC CGCTCCACGG CAAAGCGTAT GGAACCCTGG TTCTTTGGGA AACACTTGAT CGGATCGTCT CGACAGGCTA TACGGTCGAC GACTACCTAG CGCTCATCGA CGAAGTGCAG GCGCACCTCG CCATGGTGTT CCATCGACTT ATCCAAGGGC CTCGTCCAAA GCTCCGGCTG TTCATCCAAG AGCGAGCCAT CGCCCCATGG GATCCGTTCA TGGCGGGACA CCTCGCCACT TGGAGCTCCC CCGTCGCAAG AAAGCCGACA CCCGATGGGG TCGTCGAAGT CGAATGCCAT GTCCTTCCAC ACAAGGACAA ATTGTCCGAT GACGAGTGGA AGCGTTGCGC AGGGCCGAAC GGTTGGACGG CCCAGCAAGG TTTTTACGTC TATCGCAATG AGCGGCTTCT CTTGGCTGGT GGCTGGCTTG GACTTGGTCC CAGCAAGGCG TGGAATCGCG AAGAGGCCCA TCGGCTTGCC AGAATCCGCC TCGACATACC TAACACCGCC GACGCCGCGT GGAAGATCGA CATCAAGAAA TCAACCGCCC GGCCACCCGT GGCGTTGCGG CCTTGGTTGA CCACGCTGGC GGAAGACACA CGCGACCGAG CGCGCAAGGT CTTCGCCTAT CGGGGATCAC CGACCCCAAG CCCAACGGGC ACACTCTTGG AGCAAGCATG GCGCGTCGAC CACACGGCGA CTGGCGCCCG ATACCGGATA GACGACAAGC ATCCTGCCGT CTCTGCCGTC CTCGAAGGCG CCGGGCCGCT TTTGCCGATG GTGAAAGCCA TGCTCAGGGT CATTCAAGAA ACCGTGCCGG TGCAGCGCAT CTGGCTCGAC ACGGCGGAGA ACAAAGAGAC GCCGCGAACG GCTTTTGCAG GCGAGGCGCC AGAAGCCGTG ATGGGGGTCA TGCGCACCAT TTACAACGAC ATGGTCGGGC GGCGCGGCAT GACCCCTGAC CTCGCCAAAC GCGCTCTTTT GTCCACTGAG CCATTTCAGA ACTTTCCAGT GCTTGTCGCG AATCTTTCAG CTTCCGACAC CTTCAACAAC CCACAGTAA
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Protein sequence | MTQKTRNAPP RANAMLEALR GLGYSTAAAL ADIIDNSISA GASEARLDFA WNGATSRISV LDDGRGMTDA ELESAMTLGD KNPLDARASH DLGRFGMGMK TASFSQCRRL TVATVKDGDT SCLRWDLTEL AAHPDSGWLM HEGAANGSEQ FLAPLHGKAY GTLVLWETLD RIVSTGYTVD DYLALIDEVQ AHLAMVFHRL IQGPRPKLRL FIQERAIAPW DPFMAGHLAT WSSPVARKPT PDGVVEVECH VLPHKDKLSD DEWKRCAGPN GWTAQQGFYV YRNERLLLAG GWLGLGPSKA WNREEAHRLA RIRLDIPNTA DAAWKIDIKK STARPPVALR PWLTTLAEDT RDRARKVFAY RGSPTPSPTG TLLEQAWRVD HTATGARYRI DDKHPAVSAV LEGAGPLLPM VKAMLRVIQE TVPVQRIWLD TAENKETPRT AFAGEAPEAV MGVMRTIYND MVGRRGMTPD LAKRALLSTE PFQNFPVLVA NLSASDTFNN PQ
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