Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_2971 |
Symbol | |
ID | 3960602 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 3276870 |
End bp | 3277634 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637917791 |
Product | ABC transporter related |
Protein accession | YP_524213 |
Protein GI | 89901742 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTAGTC CGATGATTCG CGCCGTCGAT GTGCACAAGC GTTTCGGCCC GGTGGAAGTG CTCAAGGGGG TTTCGCTGGA CGTCGACAAG GGCGAGGTGC TCGCCGTCAT CGGTCCGTCG GGATCGGGCA AGAGCACCTT CCTGCGCTGC TTGATCCATC TGGAGACCAT CCACCGCGGC AGCATAGAGA TCGAGGGCGA GTCGCTGGTG GCAACCGATG CCCAGGGCCA CTGCAAATAC GTGCCGGAAG CCGACATCCG CCGCGTCTGT CGCAAGATGG GCATGGTCTT TCAGCACTTC AACTTGTTTC CCCATTTGAC CGTCCTGCAA AACCTCATCG AGGCGCCGCT GACGGTGAAG ACGGCGCGCC TGGATGACAT CGTGCCCAAG GCCGAGGCGC TCTTACGCAA GGTCGGACTG TTCGACAAGC GCAACAGTTA TCCCTCGCGC CTGTCTGGCG GCCAGAAGCA GCGCGTGGCC ATCGCGCGGG CCCTGGCGAT GGAGCCCGAC ATCATGCTGT TCGATGAGCC AACCTCGGCG CTGGATCCTG AGCTCACCGG TGAAGTGCTG AACACCATGC GCGCGTTGGC CGAGGAGCAC ATGACGATGA TTGTCGTCAC GCATGAAATG GCATTCGCCC GTGAAGTTGC CGGCCGCGTC GTCTTCATGG ACGGCGGGAC CATCGTCGAA GCGCGCCCGG CGCGCGAGCT GTTTGCGGCA CCAAGGCATC CCCGCACCCG AGCTTTTCTG GAGAAAATGC TCTAG
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Protein sequence | MTSPMIRAVD VHKRFGPVEV LKGVSLDVDK GEVLAVIGPS GSGKSTFLRC LIHLETIHRG SIEIEGESLV ATDAQGHCKY VPEADIRRVC RKMGMVFQHF NLFPHLTVLQ NLIEAPLTVK TARLDDIVPK AEALLRKVGL FDKRNSYPSR LSGGQKQRVA IARALAMEPD IMLFDEPTSA LDPELTGEVL NTMRALAEEH MTMIVVTHEM AFAREVAGRV VFMDGGTIVE ARPARELFAA PRHPRTRAFL EKML
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