Gene Rfer_2968 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_2968 
Symbol 
ID3962249 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp3274459 
End bp3274986 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content59% 
IMG OID637917787 
ProductClpXP protease specificity-enhancing factor 
Protein accessionYP_524210 
Protein GI89901739 
COG category[R] General function prediction only 
COG ID[COG2969] Stringent starvation protein B 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.816462 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTGACG CCACTGACGC CCCCTCCACT CGTCCCTATC TTATTCGGGC TTTGTACGAG 
TGGTGTACCG ACAATGGGTT CACGCCCTAT CTTGCCGTGG CTGTGGACGA CAGTGTGCGG
GTTCCGCGCG AGTACGTGAA AGACGGGCAG ATTGTGCTTA ACCTCAGCCT TGATGCCACG
AGTTCGCTGC AACTCGGCAA TGACTTCATT GAGTTCAAAG CGCGCTTTGG CGGAACGGCA
CGTGAAATCG TCGTGCCGGT TCACCAAGTC AGCGCCATTT ACGCGCGGGA GAACGGGCAA
GGTATGGCTT TCCCATTGAG CACCCCTCAA CCGGTTAAGG CCGCTGCATC GGCCGCAAAA
AGCCTGGTTT CTGTGCCAGC CCGCGATGAC ACAAGCGAGC GGCCACTTGC GCCGGTTCAA
TTGGCGAGCG TCGAGTCGGA GCAGCCAAAC GATGAGACGG GCAAAAATCC GAATCCACCC
CAACCCCCGA CCCCCGGCGC CAGACCGGCA CTGACACGGG TGAAATAA
 
Protein sequence
MIDATDAPST RPYLIRALYE WCTDNGFTPY LAVAVDDSVR VPREYVKDGQ IVLNLSLDAT 
SSLQLGNDFI EFKARFGGTA REIVVPVHQV SAIYARENGQ GMAFPLSTPQ PVKAAASAAK
SLVSVPARDD TSERPLAPVQ LASVESEQPN DETGKNPNPP QPPTPGARPA LTRVK