Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_2955 |
Symbol | |
ID | 3962236 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 3264657 |
End bp | 3265028 |
Gene Length | 372 bp |
Protein Length | 123 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637917774 |
Product | histidine triad (HIT) protein |
Protein accession | YP_524197 |
Protein GI | 89901726 |
COG category | [F] Nucleotide transport and metabolism [G] Carbohydrate transport and metabolism [R] General function prediction only |
COG ID | [COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.550959 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATGACA TCGTTGACAG TGACCCCAAC TGCCTGTTCT GCAACATTGT GGCGGGCAAG ATTCCATCCA AAGTGGTGTA TCAGGACGAT GAAATCTTTG TCTTCGATGA CATCCATCCG TGGGCGCCGG TGCACTTTTT GATGATCCCC AAGCGGCACA TTCCGTCCAT GGCACATGTC GGATCCGAAC AGGCAGCGCT GCTCGGGCAC ATGCTGGCGC TGGCGCCCCA ACTGGCCTTG CAGCAAGGCT GTAATCCTTA CCCACAGGGG GGGTTTCGCA TCCTCTGCAA CACTGGCGAC GAGGGGCGCC AGGAGGTGCG ACACCTGCAT ATCCACGTGA TGGGCGGCGC GCGCCCATGG CTCAAGGGTT AA
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Protein sequence | MNDIVDSDPN CLFCNIVAGK IPSKVVYQDD EIFVFDDIHP WAPVHFLMIP KRHIPSMAHV GSEQAALLGH MLALAPQLAL QQGCNPYPQG GFRILCNTGD EGRQEVRHLH IHVMGGARPW LKG
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