| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2908 |
|---|
| Symbol | |
|---|
| ID | 3963388 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | - |
|---|
| Start bp | 3216877 |
|---|
| End bp | 3217356 |
|---|
| Gene Length | 480 bp |
|---|
| Protein Length | 159 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637917727 |
|---|
| Product | NUDIX hydrolase |
|---|
| Protein accession | YP_524150 |
|---|
| Protein GI | 89901679 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG1051] ADP-ribose pyrophosphatase |
|---|
| TIGRFAM ID | [TIGR00586] mutator mutT protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAGCG CGATGCTGGT CGCTGACGCC GCGCTGCCGC GCGAAGGTGG CGCCAATCGC
CCGGTTGTTG ATGTCGCGGT TGGTGTTCTG ATCCGCCCGG ATGGCGGCTT TTTGCTCACT
TCCCGGCCAG TGGGCAAAGT CTATGCCGGT TATTGGGAGT TTCCGGGTGG CAAGCTGGAA
GCGGGTGAAG GCGTGGCCCA AGCCTTGCAC CGCGAGTTGC ATGAAGAACT CGGCATCACC
ATCGGCCCGG TAATGCCTTG GCGCGTTGAA ATGGTGGACT ACCCCCACGC CCTGGTGCGT
TTGAACTTCT GCAAGGTTTT CAACTGGATG GGCGACTTGC AGATGCGCGA AGCGCAATTG
TTCGCGTGGC AACAGTTGCC GGTGCAGGTG GCACCCGTAC TGCCCGGCAC GGTGCCGGTG
CTGCAATGGC TGGCCGATGA GCGTGGCTTC AAGAATGCTA CTTATTTAGT AGCTACTTAA
|
|---|
| Protein sequence | MSSAMLVADA ALPREGGANR PVVDVAVGVL IRPDGGFLLT SRPVGKVYAG YWEFPGGKLE
AGEGVAQALH RELHEELGIT IGPVMPWRVE MVDYPHALVR LNFCKVFNWM GDLQMREAQL
FAWQQLPVQV APVLPGTVPV LQWLADERGF KNATYLVAT
|
|---|
| |