Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_2904 |
Symbol | |
ID | 3963384 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 3214374 |
End bp | 3215216 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637917723 |
Product | prepilin peptidase |
Protein accession | YP_524146 |
Protein GI | 89901675 |
COG category | [N] Cell motility [O] Posttranslational modification, protein turnover, chaperones [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1989] Type II secretory pathway, prepilin signal peptidase PulO and related peptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGGTGG CAACATGGTT TGACGCCACC GTGCTGGGCG TTCTGGGCTT GTTGATTGGC AGCTTTCTCA ACGTGGTGAT TTACCGGTTA CCGGTCATGC TGGAAGCGCA GTGGAAAGCC GAGTGCGCCG AAATGACCGG TAAAGAAACG ACGTCGGCAG AGAAGTTCAA TCTGGCCGTA CCTCGCTCGC GCTGCCTGAA GTGCGACCAT CAAATCCAGT GGTATGAAAA CATTCCGGTG TTCAGCTATC TCTTTTTACG GGGAAAATGT TCAAACTGCA AGGCTCCCAT CAGCTTGCGT TACCCCTTGG TGGAGCTGGC AACGGCTGCC CTGTTTGTTT ATTGCGGCTG GAAATGGGGC GCCACACCCA CTGCTCTGGT CTGGTGCGGT TTCGGTGCCA CCATGCTGGC GTTGGGCTGC ATCGACTGGG ACACCACGCT GTTGCCGGAT GACATCACCC TGCCGCTGCT CTGGGCGGGC TTGATTGCCG CCGCGCTGCA ATGGACACCC GTCGCGCTGC CAGAGGCGCT TTGGGGCGCT GTGGCGGGCT ATGTGTCACT GTGGCTGGTT TATTGGGCCT TCAAGCTCGT GACCGGCAAG GAAGGCATGG GTTTTGGCGA CTTCAAGCTG TTTGCTGCAC TGGGTGCCTG GTTCGGCTGG CAGGCGCTGG TGCCCATCAT TTTGATGGCT TCGGTGATTG GCGCGGTGAT TGGCATTGCC ATGAAATTCT CCAGCGGGTT GCGTGAAGGT GGCTACATTC CTTTCGGGCC TTTTCTGGTC GGCGCCGGCC TGACTGCGAT GATTTTTGGC CCCGGCTCGA TTCTTCGCGC GTTTGGGCTC TAG
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Protein sequence | MLVATWFDAT VLGVLGLLIG SFLNVVIYRL PVMLEAQWKA ECAEMTGKET TSAEKFNLAV PRSRCLKCDH QIQWYENIPV FSYLFLRGKC SNCKAPISLR YPLVELATAA LFVYCGWKWG ATPTALVWCG FGATMLALGC IDWDTTLLPD DITLPLLWAG LIAAALQWTP VALPEALWGA VAGYVSLWLV YWAFKLVTGK EGMGFGDFKL FAALGAWFGW QALVPIILMA SVIGAVIGIA MKFSSGLREG GYIPFGPFLV GAGLTAMIFG PGSILRAFGL
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