| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2878 |
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| Symbol | |
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| ID | 3963092 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 3180207 |
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| End bp | 3181364 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637917697 |
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| Product | Rieske (2Fe-2S) protein |
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| Protein accession | YP_524120 |
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| Protein GI | 89901649 |
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| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
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| COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTGATT TAAGTCTTCA ACTGCAGCAG GCCACCGGCC AACTACCAGT TTCAAGCTAC
TTTGACGACG CGCTGTACCA GCGCGAACTG CAAACCCTGT TCCAGCATGG CCCGCGCTAT
GTTGGGCATC GGCTGAGCGT GCCCGATGTG GGCGATTACG CCACGCTGGC GCACGAAGGT
CACGGGCGCG CCCTGGTGCA CACGCCGCAG GGAATAGAGC TGATCTCCAA CGTCTGCCGC
CATCGCCAGG CCGTGATGCT GCAGGGGCGC GGCTCGGTGG ACATGACGCA TGCGGGCGCG
GCGGCAGGCA ACATTGTGTG CCCCTTGCAC CGCTGGACCT ACAGCGCCAG CGGTGCGCAG
CCGGCCGGCA CCTTGCTGGG CGCGCCGCAC TTCCCGCACG ACCCGTGCCT GAACCTGCAC
AACTACCCGC TCAAAGAATG GAACGGCCTG CTGTTTGAAG ACAACGGCCG CGACATCGAG
GCCGATCTGG CGGCCATGGG GCCGCGCGCC GAGCTCGATT TTGCCGGCTT TGTGTTGGAC
AAAGTGGAGT TGCACGAGTG CAACTACAAC TGGAAGACCT TCATTGAGGT CTATCTGGAG
GACTACCACG TCGGCCCGTT CCATCCCGGT CTGGGCGGTT TTGTCACTTG TGATGACCTG
CGCTGGGAAT TCAAGGAAAA CTACTCGGTG CAAACCGTCG GCCTGGGCAC AGGGGTAACC
AGCCCCCGCA GCAAAGCCGG CAGCCCGGTG TACCAGCGCT GGCAGGACGC CCTCAACAGC
TACCGCAACG ACGCCTTGCC CAAGCAGGGC GCGATCTGGC TCACCTATTA CCCGCACATC
ATGATCGAGT GGTATCCGCA TGTGCTGACG GTCTCGACCC TGCACCCGAT GGGTGTCGGC
AAGACCCTGA ACAAGGTCGA GTTTTATTAC CCGGAAGAGA TTCAGGCCTT TGAGCGTGAG
TTTGTGGAGG CGCAGCAAGC CGCTTACATG GAAACCTGTC TGGAGGACGA CGAGATCGGC
GAGCGTATGG ACGCCGGTCG CAGGGCGCTC CTGCAGCGTG GCGACAACGA GGTCGGCCCC
TACCAGAGCC CGATGGAAGA CGGCATGCAG CAGTTTCATG ACTGGTACCG GCGTCGCATG
AGCGATCGGC CCGACTAG
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| Protein sequence | MSDLSLQLQQ ATGQLPVSSY FDDALYQREL QTLFQHGPRY VGHRLSVPDV GDYATLAHEG
HGRALVHTPQ GIELISNVCR HRQAVMLQGR GSVDMTHAGA AAGNIVCPLH RWTYSASGAQ
PAGTLLGAPH FPHDPCLNLH NYPLKEWNGL LFEDNGRDIE ADLAAMGPRA ELDFAGFVLD
KVELHECNYN WKTFIEVYLE DYHVGPFHPG LGGFVTCDDL RWEFKENYSV QTVGLGTGVT
SPRSKAGSPV YQRWQDALNS YRNDALPKQG AIWLTYYPHI MIEWYPHVLT VSTLHPMGVG
KTLNKVEFYY PEEIQAFERE FVEAQQAAYM ETCLEDDEIG ERMDAGRRAL LQRGDNEVGP
YQSPMEDGMQ QFHDWYRRRM SDRPD
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