Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_2748 |
Symbol | |
ID | 3963112 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 3033865 |
End bp | 3034887 |
Gene Length | 1023 bp |
Protein Length | 340 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637917567 |
Product | extracellular solute-binding protein |
Protein accession | YP_523992 |
Protein GI | 89901521 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.715028 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTTCA AGAAAATCGC GATCGGCATG GTCATGCTGG CCGCTTGCCT TACTACGTCC GCTTTTGCAC AGTCGATCGA GAAATCAAAG GTCTCGATCG CGGTCGGCGG GAAAAATCTT TTCTACTATC TGCCGCTGAC CATCGCTGAG CAACTCGGCT ATTTCAAGGA CGAAGGTCTG GAGGTCGAGA TCAGCGATTT CGCCGGCGGT TCGAAAGCTC TGCAGGCGCT CATCGGTGGC AGCGCTGATG TCGTCTCAGG CGCCTTCGAG CATACGATCA ACATGCAGGC CAAGGGCCAG ATGATCACGG CTTTCGTGTT GCAGGGCCGG GCGCCGCAGA TCGTGTTCGG CGTCTCGAAC AAGACCCTGC CGAACTACAA AAGCATCGCC GACTTGAAAG GCAAGAAGAT CGGCGTCTCC GCACCCGGTT CGTCAACCAA CATCATGGCC AATTTCGTCC TGTCCAAGGG CGGCCTGAAG CCGACTGATG TGTCCTTCAT CGGTGTGGGT ACCTCTGCCG GCGCTTTGTC GGCACTGCGT TCCGGGCAAA TCGATGCGAT CTCGAACCTG GACCCGGTGA TCACCATGCT GCAGCAGAAA AACGAGATCA GGGTGATTGC CGATACCCGC AAGCTCTCCG ACACCAATGC CTTCTTCGGC GGACCGATGC CAGCCGGTAC CCTGTACGCG ACGGAGGCTT TCGTCAAGAA ATATCCGAAC ACGACCCAGG CGCTCACAAA TGCCATGGTC CGAGCCCTCA AATGGCTGCA AACCGCAGGA CCGTCGGATA TCGTCAAGGT GGTGCCGGAA AGTTTTCTGC TCGGTGACCG CGCTCTTTAT CTTGATGCCT TCATGAACAT ACGCGGCGCA CTCTCACCGG ATGGCAGCTT CCCTGATGCA GGCGCTGCAA CGGCCTTGCG CACGCTCACT GCGTTTGAGC CCGAGCTGGC GAACAAGAAA ATCGACCTGT CAAAGACCTT CACGAACGAG TTCGTCAAAA AAGCCAACGC GAAATATCGA TGA
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Protein sequence | MNFKKIAIGM VMLAACLTTS AFAQSIEKSK VSIAVGGKNL FYYLPLTIAE QLGYFKDEGL EVEISDFAGG SKALQALIGG SADVVSGAFE HTINMQAKGQ MITAFVLQGR APQIVFGVSN KTLPNYKSIA DLKGKKIGVS APGSSTNIMA NFVLSKGGLK PTDVSFIGVG TSAGALSALR SGQIDAISNL DPVITMLQQK NEIRVIADTR KLSDTNAFFG GPMPAGTLYA TEAFVKKYPN TTQALTNAMV RALKWLQTAG PSDIVKVVPE SFLLGDRALY LDAFMNIRGA LSPDGSFPDA GAATALRTLT AFEPELANKK IDLSKTFTNE FVKKANAKYR
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