| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2696 |
|---|
| Symbol | |
|---|
| ID | 3964242 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | - |
|---|
| Start bp | 2966032 |
|---|
| End bp | 2966517 |
|---|
| Gene Length | 486 bp |
|---|
| Protein Length | 161 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637917517 |
|---|
| Product | YbaK/prolyl-tRNA synthetase associated protein |
|---|
| Protein accession | YP_523943 |
|---|
| Protein GI | 89901472 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2606] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00011] ybaK/ebsC protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGAAGC ACGTCAGCCT GACGCCCGCC ACCCAATTGC TCAAGCGCAG CAAGGTGGCG
TTTACCGAGC ATCCGTATGA GTACCTGGAG CACGGCGGCG CTTTGCACAG TGCCTCCGAG
CTCGGCTGGG ATCCCTACAC GGTGGTTAAA ACGCTCATCA TGCAAGACCA GGATGCCCGC
CCGCTGGTGG TGTTGATGCA CGGCAACCGC AAGGTCTCGA CCAAAAATCT GGCGCGTCAG
ATCGGCGTCA AATCGGTGGA ACCCTGTGCG CCCGAGGTGG CGAATCGGCA CAGCGGTTAT
CTGGTGGGCG GCACCTCGCC GTTTGGCACA CGCCGCGTCA TGCCGGTGTT TATGGAGTCC
AGCATTCTGG CCCTGCCAAA AATCCTGATC AATGGCGGGC GCCGGGGCTA TCTGGTCGGG
TTGGACCCGC AGGTGTGTGT GGATTTGTTG GGCGCCAAGC CGGTGCAGTG CGCACTGGTG
GACTGA
|
|---|
| Protein sequence | MAKHVSLTPA TQLLKRSKVA FTEHPYEYLE HGGALHSASE LGWDPYTVVK TLIMQDQDAR
PLVVLMHGNR KVSTKNLARQ IGVKSVEPCA PEVANRHSGY LVGGTSPFGT RRVMPVFMES
SILALPKILI NGGRRGYLVG LDPQVCVDLL GAKPVQCALV D
|
|---|
| |