| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2682 |
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| Symbol | |
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| ID | 3962015 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 2953153 |
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| End bp | 2954376 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637917503 |
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| Product | O-succinylhomoserine sulfhydrylase |
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| Protein accession | YP_523929 |
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| Protein GI | 89901458 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
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| TIGRFAM ID | [TIGR01325] O-succinylhomoserine sulfhydrylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGGATA AAAAATTGCC TGCACAGTTG CACCGCGACA CGTTGGCGGT GCGTGCAGGC
GTTGAGCGAA GCCAATATGG CGAAAACTCC GAAGCCCTGT ACCTGACCAG CAGTTTTGTG
CAGCCCGATG CTGAGACCGC CCGCAAGCGT TTCGCCATGG AGGAAGATGG TTACACCTAC
ACCCGGGTCA GCAACCCCAC CGTCTCGGGC ATGGAGCAGC GCCTGGCCGC GCTGGAAGGA
ACCGAGGCCG CGATTGCCAC CAGCAGTGGC ATGGCGGCCG TGTTGCTGCT GGGCATGGGA
CTGTTACGTG CGGGAGACCA TGTGGTGTGT TCGCAGTCGG TTTTTGGCTC TACCCTGCGA
TTGTTTGCTA CTGAGTTTGC CAAATTTGGT GTCACGACGA CTTTTGTGTC GCAGACCGAC
GTGGCGCAAT GGCAAGCAGC GTTGCAGCCC AATACCCGTT TGCTGTTTGC CGAAACACCG
ACCAACCCGT TGACCGACAT TTGCGACATC TCCGCGCTGG CCCGTGTGGC GCACGCGGGC
GGTGCGCTAC TGGCGGTGGA CAATTGTTTT TGTACCCCGG CATTGCAAAG ACCGATCGAG
TATGGGGCCG ACTTTGTCAT TCATTCCGGC ACCAAGTATC TGGACGGCCA GGGCAGGGTG
GTGGCGGGCG CCATTTGTTG CTCGCAAAAA TATGTCAATG ATGTGTTTTG GCCGATTAAT
CGAACCGTGG GCATGGTGCT CTCGCCCTTC AATGCGTGGG TGGTGACCAA GGGGATGGAG
ACACTGTCGC TACGGATGAA GGCGCAGTGC GACAGCGCGC TGGATTTGGC CAACTGGCTG
CAAGACCAGC CGCAAGTTGC GCGGGTCTAT TACCCCGGCC TGGCCTCGCA TCCGCAGCAT
GCCTTGGCCA TGCGCCAGCA AAGCGGGCTG GGTGGCGCTG TGGTGTCGTT TGATGTGCGA
GCACCAGACG CAACGCAGGC GCGCAGCAAT GCTTTTCATG TGATCGACAG CACCCAGGTG
TGCTCGATCA CCACCAACCT GGGCGACACC AAAACCACCA TTGCCCACCC CGCCACCACC
TCGCACGGTC GTCTCACCGA AGACCAACGC CAGGCCGCTG GCATCGGTCA GGGCTTGATT
CGCATGGCAG TGGGCCTGGA CCACATTGAC GATCTCAAGG CCGACCTGCT GCGCGGCCTG
CAGACCTTAA GTGCACTGAA ATGA
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| Protein sequence | MTDKKLPAQL HRDTLAVRAG VERSQYGENS EALYLTSSFV QPDAETARKR FAMEEDGYTY
TRVSNPTVSG MEQRLAALEG TEAAIATSSG MAAVLLLGMG LLRAGDHVVC SQSVFGSTLR
LFATEFAKFG VTTTFVSQTD VAQWQAALQP NTRLLFAETP TNPLTDICDI SALARVAHAG
GALLAVDNCF CTPALQRPIE YGADFVIHSG TKYLDGQGRV VAGAICCSQK YVNDVFWPIN
RTVGMVLSPF NAWVVTKGME TLSLRMKAQC DSALDLANWL QDQPQVARVY YPGLASHPQH
ALAMRQQSGL GGAVVSFDVR APDATQARSN AFHVIDSTQV CSITTNLGDT KTTIAHPATT
SHGRLTEDQR QAAGIGQGLI RMAVGLDHID DLKADLLRGL QTLSALK
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