| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2661 |
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| Symbol | |
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| ID | 3960968 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 2927990 |
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| End bp | 2929015 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637917479 |
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| Product | putative transmembrane protein |
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| Protein accession | YP_523908 |
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| Protein GI | 89901437 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4966] Tfp pilus assembly protein PilW |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.334785 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCACGCC GCCTTCCCAC TACAGGCCGC AAGCAGCGCG GCTTGACGCT GGTTGAGTTA
CTGGTCGCCC TCGGTCTGGG TCTGCTGGTC GTGGTCATTG CCGCAACGGC TCTTTTGCTG
GGCCAGCAAG GCTACCGCAG CGTCGACACC ACCACCCAGC TGCGGGACCG GGAGCGTTTT
GCCGCTGACC TGCTGGCACG CGTCATTATT CAAACGGGTT ATCAGGACCT GGGGGCTGGC
AGTGTTTCCC TGCGCTCAAC AGCCAAACTT CTTGGCAATG ATCCAGAGCC CGATATTTAT
GGCTGGAACA ACGCGATTTA CAAAGATCCT GACGACCTGG TCCTGAGTAC CAGCACCAAG
ATCACTAACG GCAACAGACC TGGCGCATGC ACGGTCAATG ACACTTCCTG CAAGAACGGC
AGCGACGTTC TGGTGGTGCG CTACCAAGGC GTGAACTCGC CAACCGATGC CACCAAGCCC
GACAACACCA TGATCAATTG CATGGGACTT GGGGAGGCCG GCTTAACGAA CGGGGATCTC
AACGATCGTG CAAGCAGTAT TTTCCATGTC ACACGAGGCA CCAATGGCGA ACCGTCCCTC
TCGTGCTCTT ACTACAATTT TGCGACCGGT GCCTGGGTCG CATCCCAACC CATGATTGAG
GGGGTTGAGT CTTTTCAGGT GCTGTTTGGC ACCGACGGCG TCACCCCCTT GACCGCGGCC
AGCGCTGCCG CCACACAAGA CACCGTCGCG GATCGCTGGC TGCGCGCCGA CCAGTTGACT
GTCGCCGGCA ACACCGCAGC CACACGCGAG AACTGGCGCC GGGTGCGGGC GGTGCGCGTC
GGCCTGGTGC TACGGGGGCC TGTGGGCTCG GCTGAGCAGG CGTATGCAGA CCCTTTCACG
CCGCTGGGCC CAAAGTATGC CAGCCCCGAT GACACAGGCT CCAGTCTGTC GGTGGCGGCG
GACCGCCGCC TGCGGCTGCA AAGTACTTTT ACCGTGCATT TACGCAACGA CCTGACGCTC
CGATGA
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| Protein sequence | MPRRLPTTGR KQRGLTLVEL LVALGLGLLV VVIAATALLL GQQGYRSVDT TTQLRDRERF
AADLLARVII QTGYQDLGAG SVSLRSTAKL LGNDPEPDIY GWNNAIYKDP DDLVLSTSTK
ITNGNRPGAC TVNDTSCKNG SDVLVVRYQG VNSPTDATKP DNTMINCMGL GEAGLTNGDL
NDRASSIFHV TRGTNGEPSL SCSYYNFATG AWVASQPMIE GVESFQVLFG TDGVTPLTAA
SAAATQDTVA DRWLRADQLT VAGNTAATRE NWRRVRAVRV GLVLRGPVGS AEQAYADPFT
PLGPKYASPD DTGSSLSVAA DRRLRLQSTF TVHLRNDLTL R
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