| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2657 |
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| Symbol | |
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| ID | 3960964 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 2924375 |
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| End bp | 2925178 |
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| Gene Length | 804 bp |
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| Protein Length | 267 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637917475 |
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| Product | lytic transglycosylase, catalytic |
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| Protein accession | YP_523904 |
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| Protein GI | 89901433 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00887082 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGCGT CTGAAAAATT CACCTTGGGC CTACGGTCTT TTGCTACCGT CATCACCAAA
GGCGTTTTTG AAATCACCCA CAGCAGTTTT GCCCTCATTG GGCTGGCTGT TATCTTTGGC
ATCATCACCT TGACCGCGCG CCCCGAATTG CGCCAGCTCG GAGAAGTCAA ATTGTTTAGC
TGGCTGCAAA CGCGCCAGAT CGTGGAGACT GGCTTCGAGA GCCAACTTGA TGCGATTGAT
CGCGCCACAG CGAGCAACCC GCAAGACTTG CCCAAGCAAC AAGCCGCGGT TGCTTTTTGG
CTCAGTAAAA AATACCGCGT GGCCCCGGAG CCCCTGAGTG CCCTGGTGGC TGAGGCCTAC
AAGATCAGCC AGCACAGCAA TCTCGATCCC ACGCTGATCC TGGCCGTCAT GGCGGTTGAA
TCCGGCTTTA ACCCCTTTGC CCAAAGCCCG GTGGGCGCGC AAGGCCTGAT GCAGGTCATG
ACCCATGTCC ACAAAGACAA GTACGAGAAC TTTGGTGGCC AGTTTGCCGC CTTTGATCCT
CTGACCAACC TGCGCGTCGG GGTCAAGGTG CTGCAAGAAT GCATCCAGCG TGCCGGCTCC
ATGGAAGGTG GTCTGCGTTA TTACGTGGGA GCTGCCAATA TAGAAGATGA TGGCGGCTAC
GCCGGCAAGG TCATGGCCGA GCACACGCGT CTGCAAATGG TGGCAAAAGG CCGCACCGTG
CCAATTTTCC GACCCCAGGT CGCGCCTGCA CCAGCACCGC GCGCGGCTGA GAACGAGACA
GTGGCCGCTG TGTTCAATTC CTGA
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| Protein sequence | MTASEKFTLG LRSFATVITK GVFEITHSSF ALIGLAVIFG IITLTARPEL RQLGEVKLFS
WLQTRQIVET GFESQLDAID RATASNPQDL PKQQAAVAFW LSKKYRVAPE PLSALVAEAY
KISQHSNLDP TLILAVMAVE SGFNPFAQSP VGAQGLMQVM THVHKDKYEN FGGQFAAFDP
LTNLRVGVKV LQECIQRAGS MEGGLRYYVG AANIEDDGGY AGKVMAEHTR LQMVAKGRTV
PIFRPQVAPA PAPRAAENET VAAVFNS
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