| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2616 |
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| Symbol | |
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| ID | 3963394 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 2880031 |
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| End bp | 2880993 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637917434 |
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| Product | cobalamin biosynthesis protein CobD |
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| Protein accession | YP_523863 |
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| Protein GI | 89901392 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1270] Cobalamin biosynthesis protein CobD/CbiB |
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| TIGRFAM ID | [TIGR00380] cobalamin biosynthesis protein CobD |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGGCAC TCGCTCTGGC TTTGCTCGTG GCGCTGGCGG TAGACCGCTA CTTCGGCGAG
CCACGCGTGC GCCTGCACCC GGTGGTGTGG ATGGGCAACT ACCTGGGCTG GGCGGGGGCG
TGGGTGCAGC GCCGTGCCCA GCAGAACCCG CAGCAGCCGG ACTTCAAGGC TTTTTGGCTT
GCAGCCCTCG TGTGGTGTTC GGGTGCAGCT ATTGTTTTAG GAGTGACTTG GGGTTTGCAG
GCGGCGCTTG GCAGCTTGCC CTGGTGGGCC GCTGGCGTGC TGCTGGGCCT GCTGCTCAAG
CCGCTGCTGG CCTGGGCCAT GCTGAAAAGC GAGGTGCTGG CGGTGGAAGC GGCCCTGGCT
GAATCGCTGG AGGCTGGCCG GGAGCGCTTG AGCTGGCTGG TGAGCCGCGA TGTGTCAGCG
TTGTCTGAAG CCCAGGTTCG TGAAAGCACG ATCGAGACGC TGGCCGAAAA CCTGAACGAC
TCGGTCGTCG CGCCCATTTT CTGGTTTGTG CTGCTGGGCC TGCCCGGTGC CGCGTTGTAC
CGCTTTGCCA ACACGGCCGA TGCCATGTGG GGCTACCCCG GCATCTACAA GGGCCAGAAC
TGGGCCTGGG CGGGCAAGTG GGCGGCGCGC GTAGACGATG TGTTGAGCTG GCTGCCCGCG
CGCATTACCG CGCTGCTCTT GCTGCTGGCG ACAGGGGCGC GAGGCTTGGC GCTGGCAGGC
CGTTTGCGCG CCGAGGCTGC CAAAACCCCG TCGCCCAACA GCGGCTGGCC CATGGCGGCG
ATGGCCTTGG GTCTGGATGT GGGCTTGCGC AAACCCGGTG TGTATGTGCT CAACCCAGCG
GGGCGCGCAG CGCTTGCGCA GGATACCGCG CAAGCCCTGG TTTATGCATC AAATACGCTT
CTAGCCCTTG TCGTCATTGC GCAAGCAGCT ATTATATTTG TAGCTATTGG GGCGCGACCA
TGA
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| Protein sequence | MMALALALLV ALAVDRYFGE PRVRLHPVVW MGNYLGWAGA WVQRRAQQNP QQPDFKAFWL
AALVWCSGAA IVLGVTWGLQ AALGSLPWWA AGVLLGLLLK PLLAWAMLKS EVLAVEAALA
ESLEAGRERL SWLVSRDVSA LSEAQVREST IETLAENLND SVVAPIFWFV LLGLPGAALY
RFANTADAMW GYPGIYKGQN WAWAGKWAAR VDDVLSWLPA RITALLLLLA TGARGLALAG
RLRAEAAKTP SPNSGWPMAA MALGLDVGLR KPGVYVLNPA GRAALAQDTA QALVYASNTL
LALVVIAQAA IIFVAIGARP
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