| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2410 |
|---|
| Symbol | |
|---|
| ID | 3961237 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | - |
|---|
| Start bp | 2651897 |
|---|
| End bp | 2652991 |
|---|
| Gene Length | 1095 bp |
|---|
| Protein Length | 364 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 637917228 |
|---|
| Product | citrate lyase ligase |
|---|
| Protein accession | YP_523658 |
|---|
| Protein GI | 89901187 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG3053] Citrate lyase synthetase |
|---|
| TIGRFAM ID | [TIGR00124] [citrate (pro-3S)-lyase] ligase
[TIGR00125] cytidyltransferase-related domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.429442 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCATGTAA TCCAGGACTA CTACTCGGAG TACCAATCCT TCACTAGTGG CGGCCTGGAC
TGGGCGGTCG AGAATTTTTC TGACAATCCG AAGCTGAAGG ACGAGATTGC CGAATTTCTG
CGAAGCTGCG ATCTGGAGCT GGATGGAAAT ATCACGGACT TCGTGACGGT CCGTGCGGCC
AACAAACTGG TGGCCTGTGC CGGGATGGGT GAAAACATCA TCAAATGTGT CGCCGTCTCT
CTTTCGCTAC GCGGTCAAAA CATTACCTTG CGCCTGATAT CCGAAGTGAC CAATTTGGCA
GCAGACATGG GGCGCTACCA CTTGTTTCTG TACACGAAAC CCGAGAACCA AGCGCTGTTT
TCGCGCTGTG GCTTCTATCC CTTGGTCGAG ATGCCGGGCA CCATCGCCCT GATGGAGAAT
TCCCCGGTTG GCCTGGCGCG CTATTGCGAC AGCCTCGCTG CCACGCGTGA GCCAGGAAAC
AAGATTGGCA GCATCGTGAT GAACGCCAAC CCTTTCACCT TCGGCCATCA ATACCTGGCG
CAGCAAGCCT CAGACGCCTG TGATTGGCTG CATGTATTTG TGGTCGGCGA AAATTCTTCG
CTCATCACCT ACGAGGATCG TCTCGCGCTG GTGCGGGACG GTCTCAAGAA CATGCCCCGC
ACGACAGTTC ACCCCGGGTC GATCTACATG ATCTCCAAGG CGACGTTTCC GAGCTATTTC
CTGAAAGACC GCGGCATTGT TGATCAATGT CATACCGCGC TCGACCTGAT TATCTTTCGT
GAGCATGTGG CACCCGCGCT GGGCATTACG CACCGTTTCG TCGGGACCGA GCCGTTCTGC
GAGGTCACCA AAAAATACAA CGCCGACATG AAGCATTGGC TGATGCAAGC CGCATCAAAG
GCGCCCGCGA TCGAGGTGGT CGAACTTGAG CGCATAGCCC ATTCTGGCAT GGCCATTTCG
GCGTCCAAAG TGCGCCGCTA CCTGCGTGCG GACGATTTCG AACACATGGC GGATCTGGTG
CCGCAGGCCA CCCTGGATTT GTTGCGGGTG AAGTATTTCG ATCCGGGTGC CCGCGTCGCA
ACCGGAACCG GTTAA
|
|---|
| Protein sequence | MHVIQDYYSE YQSFTSGGLD WAVENFSDNP KLKDEIAEFL RSCDLELDGN ITDFVTVRAA
NKLVACAGMG ENIIKCVAVS LSLRGQNITL RLISEVTNLA ADMGRYHLFL YTKPENQALF
SRCGFYPLVE MPGTIALMEN SPVGLARYCD SLAATREPGN KIGSIVMNAN PFTFGHQYLA
QQASDACDWL HVFVVGENSS LITYEDRLAL VRDGLKNMPR TTVHPGSIYM ISKATFPSYF
LKDRGIVDQC HTALDLIIFR EHVAPALGIT HRFVGTEPFC EVTKKYNADM KHWLMQAASK
APAIEVVELE RIAHSGMAIS ASKVRRYLRA DDFEHMADLV PQATLDLLRV KYFDPGARVA
TGTG
|
|---|
| |