Gene Rfer_2408 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_2408 
Symbol 
ID3961235 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp2650686 
End bp2651558 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content59% 
IMG OID637917226 
Productcitrate lyase, beta subunit 
Protein accessionYP_523656 
Protein GI89901185 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2301] Citrate lyase beta subunit 
TIGRFAM ID[TIGR01588] citrate lyase, beta subunit 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0539054 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCTGC GTCGAAGCAT GTTGTTCATG CCGGGTTCCA ACTCGGCGAT GTTGAGTACC 
GCCTTTGTCT TCAAGCCCGA TTCCATCATG TTCGATCTTG AAGACGCCGT CGCATTGCGC
GAGAAAGACG CGGCACGCAT TCTGGTCTTT CATGCGCTGC AGCACCCGCT GTACAAGGAC
ATTGAAACCG TTGTCAGAAT CAACCCGCTT GATACCCCGT TCGGGCTCGA TGACCTTGAG
GCGGCGGTGC GTGGCGGCGC CCACATCGTG CGGCTGCCCA AGACAGACTC CGCAGACGAT
GTGCGCCGCC TGGAGGCGGA GATCGCGCGC ATCGAGCATG CATGCGGCCG CGAAGTCGGC
TCCACGCAAC TGATGGCCGC CGTCGAGTCG GCATCTGGCG TTGTCAATGC AGTGTCCATT
GCAACATCAA GTCCGCGCAT GATGGGCATC GCATTGGCCG GTTTTGACTA CGTGATGGAC
ATGCAGACCG AGCGCGGCGA CGGCACCGAA CTGTTCTACG CGCGCTGTGC CGTATTGCAC
GCGGCGCGTG TTGCAAAAAT TGATGCATTC GACGTGGTGT TTTCCGACGT TAATGACGAC
GACGGTTTCC TCAAGGAAGT CGATCTGATC AGAAGGCTGG GATTCAACGG CAAGTCCCTC
ATCAACCCGC GCCAGATCGA GCTGCTGCAC AACGCATATG CGCCAACGGA AGAGGACGTC
GAATATGCCA GGCGCGTGGT CGCGGCCGCC GACAAAGCGG AACGTGAAGG CCTTGGTGTC
ATCGCACTCA ACGGCAAGAT GATCGATGCC CCCATCGTCA ACCATGCCCG TCGCGTGATT
CAGAGCGCTT TGGCCTCGGG TGTGCGCAAG TAA
 
Protein sequence
MKLRRSMLFM PGSNSAMLST AFVFKPDSIM FDLEDAVALR EKDAARILVF HALQHPLYKD 
IETVVRINPL DTPFGLDDLE AAVRGGAHIV RLPKTDSADD VRRLEAEIAR IEHACGREVG
STQLMAAVES ASGVVNAVSI ATSSPRMMGI ALAGFDYVMD MQTERGDGTE LFYARCAVLH
AARVAKIDAF DVVFSDVNDD DGFLKEVDLI RRLGFNGKSL INPRQIELLH NAYAPTEEDV
EYARRVVAAA DKAEREGLGV IALNGKMIDA PIVNHARRVI QSALASGVRK